Strain identifier
version 8.1 (current version)
General
@ref: 47709
BacDive-ID: 144100
keywords: Bacteria
description: Campylobacter upsaliensis CCUG 23017 is a bacterium that was isolated from Feces,child,Dakar,concomittant isol. of Salmonella.
NCBI tax id
- NCBI tax id: 28080
- Matching level: species
doi: 10.13145/bacdive144100.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Epsilonproteobacteria
- order: Campylobacterales
- family: Campylobacteraceae
- genus: Campylobacter
- species: Campylobacter upsaliensis
- full scientific name: Campylobacter upsaliensis Sandstedt and Ursing 1991
@ref: 47709
domain: Bacteria
phylum: Proteobacteria
class: Epsilonproteobacteria
order: Campylobacterales
family: Campylobacteraceae
genus: Campylobacter
species: Campylobacter upsaliensis
type strain: no
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68373 | 16199 | urea | - | hydrolysis |
| 68373 | 17632 | nitrate | + | reduction |
| 68373 | 606565 | hippurate | - | hydrolysis |
| 68373 | 78019 | triphenyltetrazolium chloride | - | reduction |
| 68373 | 17634 | D-glucose | - | assimilation |
| 68373 | 30031 | succinate | - | assimilation |
| 68373 | 30089 | acetate | - | assimilation |
| 68373 | 17272 | propionate | - | assimilation |
| 68373 | 25115 | malate | - | assimilation |
| 68373 | 16947 | citrate | - | assimilation |
antibiotic resistance
| @ref | ChEBI | metabolite | is antibiotic | is sensitive | sensitivity conc. |
|---|---|---|---|---|---|
| 68373 | 48923 | erythromycin | yes | yes | 14 µg |
| 68373 | 474053 | cefazolin | yes | yes | 224 µg |
| 68373 | 100147 | nalidixic acid | yes | yes | 84 µg |
metabolite production
- @ref: 68373
- Chebi-ID: 16136
- metabolite: hydrogen sulfide
- production: no
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68373 | catalase | - | 1.11.1.6 |
| 68373 | alkaline phosphatase | + | 3.1.3.1 |
| 68373 | L-aspartate arylamidase | + | 3.4.11.21 |
| 68373 | L-arginine arylamidase | - | |
| 68373 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
| 68373 | gamma-glutamyltransferase | - | 2.3.2.2 |
| 68373 | esterase | - | |
| 68373 | urease | - | 3.5.1.5 |
API CAM
| @ref | URE | NIT | EST | HIP | GGT | TTC | PYRA | ArgA | AspA | PAL | H2S | GLU | SUT | NAL | CFZ | ACE | PROP | MLT | CIT | ERO | CAT |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47709 | - | + | - | - | - | - | - | - | + | + | - | - | - | - | - | - | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
- @ref: 47709
- sample type: Feces,child,Dakar,concomittant isol. of Salmonella
- sampling date: 1988
- geographic location: Strasbourg
- country: France
- origin.country: FRA
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | #Child |
| #Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
| #Infection | #Disease |
External links
@ref: 47709
culture collection no.: CCUG 23017
straininfo link
- @ref: 99342
- straininfo: 52430
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 47709 | Curators of the CCUG | https://www.ccug.se/strain?id=23017 | Culture Collection University of Gothenburg (CCUG) (CCUG 23017) | |
| 68373 | Automatically annotated from API CAM | |||
| 99342 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID52430.1 |