Strain identifier

BacDive ID: 143448

Type strain: No

Species: Leptotrichia buccalis

NCBI tax ID(s): 40542 (species)

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General

@ref: 46979

BacDive-ID: 143448

keywords: Bacteria

description: Leptotrichia buccalis CCUG 19169 is a bacterium that was isolated from Human subgingival pockett.

NCBI tax id

  • NCBI tax id: 40542
  • Matching level: species

doi: 10.13145/bacdive143448.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/fusobacteriota
  • domain: Bacteria
  • phylum: Fusobacteriota
  • class: Fusobacteriia
  • order: Fusobacteriales
  • family: Leptotrichiaceae
  • genus: Leptotrichia
  • species: Leptotrichia buccalis
  • full scientific name: Leptotrichia buccalis (Robin 1853) Trevisan 1879 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Leptothrix buccalis

@ref: 46979

domain: Bacteria

phylum: Fusobacteria

class: Fusobacteriia

order: Fusobacteriales

family: Leptotrichiaceae

genus: Leptotrichia

species: Leptotrichia buccalis

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6838017632nitrate-reduction
6838027897tryptophan-energy source
6838029985L-glutamate-degradation
6838016199urea-hydrolysis
6837727897tryptophan-energy source
6837716199urea-hydrolysis
6837718257ornithine-degradation
6837717992sucrose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717634D-glucose+builds acid from
6837417057cellobiose-builds acid from
6837430911sorbitol-builds acid from
6837417268myo-inositol-builds acid from
6837427082trehalose-builds acid from
6837462345L-rhamnose-builds acid from
6837418394palatinose-builds acid from
6837416899D-mannitol-builds acid from
68374Potassium 5-ketogluconate-builds acid from
6837418024D-galacturonic acid-builds acid from
6837418403L-arabitol-builds acid from
6837416199urea-hydrolysis
6837418257ornithine-degradation
6837928087glycogen-fermentation
6837917992sucrose+fermentation
6837917716lactose-fermentation
6837917306maltose+fermentation
6837916899D-mannitol-fermentation
6837965327D-xylose-fermentation
6837916988D-ribose-fermentation
6837916199urea-hydrolysis
6837917632nitrate-reduction
683794853esculin+hydrolysis
6838016634raffinose+fermentation
6838016024D-mannose+fermentation
6838029016arginine-hydrolysis
6837418333D-arabitol-builds acid from
6837430849L-arabinose-builds acid from
6837417992sucrose-builds acid from
6837417634D-glucose-builds acid from
6837427897tryptophan-energy source
6837415792malonate-assimilation
6837415963ribitol-builds acid from
6837417306maltose-builds acid from
6837425094lysine-degradation
6837429016arginine-hydrolysis
683795291gelatin-hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
6837735581indoleno
6837435581indoleno
6838035581indoleno

metabolite tests

@refChebi-IDmetaboliteindole test
6838035581indole-
6837735581indole-
6837435581indole-

enzymes

@refvalueactivityec
68380glycin arylamidase-
68380tyrosine arylamidase-
68380leucine arylamidase-3.4.11.1
68380phenylalanine arylamidase-
68380N-acetyl-beta-glucosaminidase-3.2.1.52
68380beta-glucuronidase-3.2.1.31
68380alpha-glucosidase+3.2.1.20
68377beta-galactosidase-3.2.1.23
68374beta-galactosidase-3.2.1.23
68374urease-3.5.1.5
68374ornithine decarboxylase-4.1.1.17
68379beta-glucosidase+3.2.1.21
68380serine arylamidase-
68380glutamyl-glutamate arylamidase-
68380histidine arylamidase-
68380alanine arylamidase-3.4.11.2
68380pyrrolidonyl arylamidase-3.4.19.3
68380leucyl glycin arylamidase-3.4.11.1
68380proline-arylamidase-3.4.11.5
68380L-arginine arylamidase-
68380alkaline phosphatase+3.1.3.1
68380tryptophan deaminase-4.1.99.1
68380alpha-fucosidase-3.2.1.51
68380glutamate decarboxylase-4.1.1.15
68380alpha-arabinosidase-3.2.1.55
68380beta-glucosidase+3.2.1.21
68380beta-Galactosidase 6-phosphate-
68380beta-galactosidase-3.2.1.23
68380alpha-galactosidase-3.2.1.22
68380arginine dihydrolase-3.5.3.6
68380urease-3.5.1.5
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase-3.4.11.5
68377alkaline phosphatase+3.1.3.1
68377lipase+
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68374L-aspartate arylamidase-3.4.11.21
68374alpha-maltosidase+
68374alpha-galactosidase-3.2.1.22
68374alpha-glucosidase+3.2.1.20
68374N-acetyl-beta-glucosaminidase-3.2.1.52
68374beta-glucuronidase-3.2.1.31
68374beta-glucosidase-3.2.1.21
68374lipase-
68374lysine decarboxylase-4.1.1.18
68374arginine dihydrolase-3.5.3.6
68379catalase-1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase-3.5.1.B15

fatty acid profile

  • @reffatty acidpercentageECL
    46979C12:0512
    46979C14:029.414
    46979C16:031.116
    46979C18:01.918
    46979C12:0 ALDE ?1.710.915
    46979C14:0 3OH/C16:1 ISO I6.815.485
    46979C16:1 ω7c1.415.819
    46979C18:1 ω7c /12t/9t11.617.824
    46979C18:1 ω9c3.517.769
    46979C18:2 ω6,9c/C18:0 ANTE7.517.724
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG
  • @reffatty acidpercentageECL
    46979C12:05.312
    46979C14:018.714
    46979C16:031.516
    46979C18:01.918
    46979C12:0 ALDE ?210.915
    46979C14:0 3OH/C16:1 ISO I7.315.485
    46979C16:1 ω7c2.115.819
    46979C18:1 ω7c /12t/9t21.917.824
    46979C18:1 ω9c2.517.769
    46979C18:2 ω6,9c/C18:0 ANTE6.817.724
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlRIBXYLMANMALLACSACGLYGCAT
46979---+--+-+------+-+--

API ID32E

@refODCADH ArgLDC LysURELARLGAT5KGLIPRPbeta GLUMANMALADOPLEbeta GURMNTINDbeta NAGbeta GALGLUSACLARADARLalpha GLUalpha GALTRERHAINOCELSORalphaMALAspA
46979-----------------------+------+-

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
46979-++++--++----

API rID32A

@refUREADH Argalpha GALbeta GALbeta GPalpha GLUbeta GLUalpha ARAbeta GURbeta NAGMNERAFGDCalpha FUCNITINDPALArgAProALGAPheALeuAPyrATyrAAlaAGlyAHisAGGASerA
46979-----++---++----+------------

Isolation, sampling and environmental information

isolation

  • @ref: 46979
  • sample type: Human subgingival pockett
  • sampling date: 1986
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Oral cavity and airways#Periodontal pocket
#Infection#Patient

External links

@ref: 46979

culture collection no.: CCUG 19169

straininfo link

  • @ref: 98816
  • straininfo: 55127

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
46979Curators of the CCUGhttps://www.ccug.se/strain?id=19169Culture Collection University of Gothenburg (CCUG) (CCUG 19169)
68374Automatically annotated from API ID32E
68377Automatically annotated from API NH
68379Automatically annotated from API Coryne
68380Automatically annotated from API rID32A
98816Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID55127.1