Strain identifier

BacDive ID: 14344

Type strain: Yes

Species: Treponema denticola

Strain history: ATCC 35405 <-- E. C. S. Chan strain a.

NCBI tax ID(s): 243275 (strain), 158 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 5260

BacDive-ID: 14344

DSM-Number: 14222

keywords: genome sequence, 16S sequence, Bacteria, anaerobe, mesophilic, Gram-negative, human pathogen

description: Treponema denticola DSM 14222 is an anaerobe, mesophilic, Gram-negative human pathogen that was isolated from human periodontal pocket.

NCBI tax id

NCBI tax idMatching level
243275strain
158species

strain history

@refhistory
5260<- ATCC; ATCC 35405 <- E. C. S. Chan;
67770ATCC 35405 <-- E. C. S. Chan strain a.

doi: 10.13145/bacdive14344.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/spirochaetota
  • domain: Bacteria
  • phylum: Spirochaetota
  • class: Spirochaetia
  • order: Spirochaetales
  • family: Treponemataceae
  • genus: Treponema
  • species: Treponema denticola
  • full scientific name: Treponema denticola (ex Flügge 1886) Chan et al. 1993

@ref: 5260

domain: Bacteria

phylum: Spirochaetes

class: Spirochaetia

order: Spirochaetales

family: Treponemataceae

genus: Treponema

species: Treponema denticola

full scientific name: Treponema denticola (ex Flügge 1886) Chan et al. 1993

type strain: yes

Morphology

cell morphology

  • @ref: 69480
  • gram stain: negative
  • confidence: 99.832

Culture and growth conditions

culture medium

  • @ref: 5260
  • name: TREPONEMA DENTICOLA MEDIUM (DSMZ Medium 909)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/909
  • composition: Name: TREPONEMA DENTICOLA MEDIUM (DSMZ Medium 909) Composition: Brain heart infusion broth 11.9617 g/l Trypticase 9.56938 g/l Agar 2.87081 g/l Yeast extract 2.39234 g/l Glucose 1.91388 g/l NaHCO3 1.91387 g/l L-Cysteine HCl 0.956938 g/l Na-thioglycolate 0.478469 g/l L-Asparagine 0.239234 g/l Thiamine pyrophosphate 0.00574161 g/l Valeric acid DL-2-Methylbutyric acid Isovaleric acid KOH Isobutyric acid Rabbit serum Distilled water

culture temp

@refgrowthtypetemperaturerange
5260positivegrowth37mesophilic
67770positivegrowth37mesophilic

Physiology and metabolism

oxygen tolerance

@refoxygen toleranceconfidence
5260anaerobe
69480anaerobe99.236

spore formation

@refspore formationconfidence
69481no100
69480no99.98

compound production

  • @ref: 5260
  • compound: proline iminopeptidase

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentlatitudelongitude
5260human periodontal pocketMontrealCanadaCANNorth America45.5017-73.5673
67770Human oral cavity

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Oral cavity and airways#Periodontal pocket

Safety information

risk assessment

  • @ref: 5260
  • pathogenicity human: yes
  • pathogenicity animal: yes
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Treponema denticola strain ATCC35405 16S ribosomal RNA gene, partial sequenceAF1392031518ena158
20218Treponema denticola 16S ribosomal RNA gene, partial sequence; 16S-23S intergenic spacer and tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequenceAF179263424ena158
20218Treponema denticola 16S ribosomal RNA gene, partial sequence; 16S-23S intergenic spacer and tRNA-Ala gene, complete sequence; and 23S ribosomal RNA gene, partial sequenceAF179264441ena158
20218Spirochaeta caldaria strain DSMZ7334 16S ribosomal RNA gene, partial sequenceEU5801411535ena744872
20218Treponema denticola gene for 16S ribosomal RNA, partial sequence, strain: JCM 8153AB6213581506ena158

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Treponema denticola ATCC 35405GCA_000008185completencbi243275
66792Treponema denticola ATCC 35405243275.7completepatric243275
66792Treponema denticola ATCC 35405637000327completeimg243275

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
motileyes83.495no
flagellatedno89.088no
gram-positiveno92.718no
anaerobicyes99.183no
halophileno81.377no
spore-formingno85.751no
thermophileno97.239no
glucose-utilyes82.547no
aerobicno98.668no
glucose-fermentyes69.238no

External links

@ref: 5260

culture collection no.: DSM 14222, ATCC 35405, JCM 8153, CIP 103919, KCTC 15104

straininfo link

  • @ref: 83489
  • straininfo: 41060

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Enzymology1321141Purification and substrate specificity of an endopeptidase from the human oral spirochete Treponema denticola ATCC 35405, active on furylacryloyl-Leu-Gly-Pro-Ala and bradykinin.Makinen KK, Makinen PL, Syed SAJ Biol ChemS0021-9258(19)49710-X1992Acrylates/*metabolism, Amino Acid Sequence, Amino Acids/analysis, Bradykinin/*metabolism, Chromatography, Chromatography, Gel, Durapatite, Humans, Hydroxyapatites, Kinetics, Metalloendopeptidases/*isolation & purification/*metabolism, Molecular Sequence Data, Oligopeptides/*metabolism, Periodontal Pocket/microbiology, Substrate Specificity, Treponema/*enzymology/growth & development/isolation & purificationMetabolism
Enzymology1563796Characterization, cloning, and binding properties of the major 53-kilodalton Treponema denticola surface antigen.Haapasalo M, Muller KH, Uitto VJ, Leung WK, McBride BCInfect Immun10.1128/iai.60.5.2058-2065.19921992Animals, Antigens, Bacterial/*analysis/genetics/metabolism, Antigens, Surface/analysis/genetics, Bacterial Adhesion, *Cloning, Molecular, Electrophoresis, Polyacrylamide Gel, Fibronectins/metabolism, Laminin/metabolism, Molecular Weight, Rabbits, Recombinant Proteins/analysis, Treponema/genetics/*immunology/physiologyMetabolism
Pathogenicity1639504Treponema denticola induces actin rearrangement and detachment of human gingival fibroblasts.Baehni PC, Song M, McCulloch CA, Ellen RPInfect Immun10.1128/iai.60.8.3360-3368.19921992Actins/*metabolism, Bacterial Adhesion, Cell Adhesion, Cells, Cultured, Fibroblasts/microbiology, Gingiva/cytology/*microbiology, Humans, Treponema/pathogenicity/*physiologyMetabolism
Metabolism1937780Sulfhydryl-dependent attachment of Treponema denticola to laminin and other proteins.Haapasalo M, Singh U, McBride BC, Uitto VJInfect Immun10.1128/iai.59.11.4230-4237.19911991Amino Acid Sequence, Animals, *Bacterial Adhesion, Binding Sites, Cysteine/pharmacology, Epithelium/microbiology, Ethylmaleimide/pharmacology, Extracellular Matrix Proteins/metabolism, Glutathione/pharmacology, Hot Temperature, Hydrogen-Ion Concentration, Laminin/*metabolism, Microscopy, Electron, Scanning, Molecular Sequence Data, Oligopeptides/metabolism, Osmolar Concentration, Periodontal Ligament/microbiology, Protein Binding, Sulfhydryl Compounds/metabolism, Swine, Treponema/*pathogenicityStress
Enzymology2174832Isolation and characterization of the Treponema denticola prtA gene coding for chymotrypsinlike protease activity and detection of a closely linked gene encoding PZ-PLGPA-hydrolyzing activity.Que XC, Kuramitsu HKInfect Immun10.1128/iai.58.12.4099-4105.19901990Chromosome Deletion, Chymases, Cloning, Molecular, Escherichia coli/genetics, *Genes, Bacterial, Microbial Collagenase/*genetics, Serine Endopeptidases/analysis/*genetics/isolation & purification, Treponema/enzymology/*geneticsPhylogeny
Enzymology3166451Isolation of a chymotrypsinlike enzyme from Treponema denticola.Uitto VJ, Grenier D, Chan EC, McBride BCInfect Immun10.1128/iai.56.10.2717-2722.19881988Chymotrypsin, Hot Temperature, Hydrogen-Ion Concentration, Molecular Weight, Protease Inhibitors/pharmacology, Serine Endopeptidases/*isolation & purification, Serine Proteinase Inhibitors, Substrate Specificity, Sulfhydryl Reagents/pharmacology, Treponema/*enzymologyPhylogeny
Enzymology3183013Enzyme profiles of oral spirochetes in RapID-ANA system.Syed SA, Salvador SL, Loesche WJJ Clin Microbiol10.1128/jcm.26.10.2226-2228.19881988Alkaline Phosphatase/analysis, Aminopeptidases/analysis, Glycoside Hydrolases/analysis, Humans, Mouth/*microbiology, Reagent Kits, Diagnostic, Treponema/*enzymologyPathogenicity
Metabolism7523301An endo-acting proline-specific oligopeptidase from Treponema denticola ATCC 35405: evidence of hydrolysis of human bioactive peptides.Makinen PL, Makinen KK, Syed SAInfect Immun10.1128/iai.62.11.4938-4947.19941994Amino Acid Sequence, Amino Acids/analysis, Angiotensin II/metabolism, Bradykinin/metabolism, Chelating Agents/pharmacology, Enzyme Activation/drug effects, Histidine, Humans, Hydrogen-Ion Concentration, Kinetics, Molecular Sequence Data, Molecular Weight, Oligopeptides/*metabolism, Prolyl Oligopeptidases, Sequence Alignment, Sequence Homology, Amino Acid, Serine, Serine Endopeptidases/chemistry/*metabolism, Sodium Chloride/pharmacology, Structure-Activity Relationship, Substance P/metabolism, Substrate Specificity, Sulfhydryl Compounds/pharmacology, Temperature, Treponema/*enzymology, Vasopressins/metabolismPathogenicity
Enzymology7534273Cloning and expression of a neutral phosphatase gene from Treponema denticola.Ishihara K, Kuramitsu HKInfect Immun10.1128/iai.63.4.1147-1152.19951995Amino Acid Sequence, Base Sequence, Cloning, Molecular, DNA, Bacterial/genetics, Gene Expression, Genes, Bacterial, Hydrogen-Ion Concentration, Molecular Sequence Data, Phosphoric Monoester Hydrolases/*genetics/metabolism, RNA, Bacterial/genetics, RNA, Messenger/genetics, Restriction Mapping, Substrate Specificity, Treponema/enzymology/*geneticsGenetics
Pathogenicity7541623Induction of cytoskeletal rearrangements and loss of volume regulation in epithelial cells by Treponema denticola.De Filippo AB, Ellen RP, McCulloch CAArch Oral Biol10.1016/0003-9969(95)98809-d1995Actins/chemistry, Bacterial Adhesion, Cell Adhesion, Cell Membrane/*microbiology, Cell Movement, Cell Size, Cell Survival, Cytoskeletal Proteins/*chemistry/physiology, Cytoskeleton/chemistry/*microbiology, Desmoplakins, Epithelium/microbiology/pathology, Humans, KB Cells, Keratins/chemistry, Protein Conformation, Treponema/*physiology
Metabolism7543886Role of the chymotrypsin-like membrane-associated proteinase from Treponema denticola ATCC 35405 in inactivation of bioactive peptides.Makinen PL, Makinen KK, Syed SAInfect Immun10.1128/iai.63.9.3567-3575.19951995Amino Acid Sequence, Amino Acids/analysis, Angiotensin I/*metabolism, Bacterial Proteins/*physiology, Bradykinin/*metabolism, Chymases, Cycloheximide/pharmacology, Humans, Molecular Sequence Data, Molecular Weight, Serine Endopeptidases/isolation & purification/*physiology, Substance P/*metabolism, Substrate Specificity, Treponema/*enzymologyPathogenicity
Pathogenicity7642139Identification of a fliG homologue in Treponema denticola.Heinzerling HF, Penders JE, Burne RAGene10.1016/0378-1119(95)00257-71995Adult, Amino Acid Sequence, Bacterial Proteins/chemistry/*genetics, Bacteriophage lambda/genetics, Base Sequence, DNA, Recombinant, Genes, Bacterial, Humans, Molecular Sequence Data, Periodontal Diseases/microbiology, Treponema/*geneticsGenetics
Phenotype7675518Evidence for two distinct locomotory phenotypes of Treponema denticola ATCC 35405.Chan EC, Qiu YS, Siboo R, Noble POral Microbiol Immunol10.1111/j.1399-302x.1995.tb00131.x1995Agar, Cell Movement, Chemotaxis, Culture Media, Phenotype, Sepharose, Treponema/classification/genetics/*physiologyCultivation
Enzymology7864624Purification and general properties of an oligopeptidase from Treponema denticola ATCC 35405--a human oral spirochete.Makinen KK, Makinen PL, Loesche WJ, Syed SAArch Biochem Biophys10.1006/abbi.1995.10921995Amino Acid Sequence, Benzoylarginine Nitroanilide/metabolism, Calcium/metabolism, Chlorhexidine/pharmacology, Diethyl Pyrocarbonate/pharmacology, Dose-Response Relationship, Drug, Humans, Hydrolysis, Isoelectric Point, Kinetics, Molecular Sequence Data, Molecular Weight, Mouth/microbiology, Peptide Hydrolases/drug effects/*isolation & purification/*metabolism, Quinolines/pharmacology, Sequence Analysis, Substrate Specificity, Treponema/*enzymologyMetabolism
Enzymology8039913Cloning and sequence analysis of a chymotrypsinlike protease from Treponema denticola.Arakawa S, Kuramitsu HKInfect Immun10.1128/iai.62.8.3424-3433.19941994Amino Acid Sequence, *Bacterial Proteins, Base Sequence, Blotting, Southern, Chymotrypsin/chemistry/*genetics/isolation & purification, Cloning, Molecular, *Genes, Bacterial, Metalloendopeptidases/*genetics, Molecular Sequence Data, Substrate Specificity, Treponema/*enzymologyGenetics
Enzymology8113954Isolation and characterization of a 53 kDa major cell envelope protein antigen from Treponema denticola ATCC 35405.Kokeguchi S, Miyamoto M, Kato K, Tanimoto I, Kurihara H, Murayama YJ Periodontal Res10.1111/j.1600-0765.1994.tb01093.x1994Amino Acids/analysis, Antigens, Bacterial/*chemistry, Bacterial Outer Membrane Proteins/*chemistry/isolation & purification, Chromatography, DEAE-Cellulose, Electrophoresis, Polyacrylamide Gel, Humans, Immunoblotting, Isoelectric Focusing, Microscopy, Immunoelectron, Periodontitis/immunology/*microbiology, Treponema/*chemistryPhylogeny
Metabolism8248625Proteolytic and oxidoreductase activity of Treponema denticola ATCC 35405 grown in an aerobic and anaerobic gaseous environment.Syed SA, Makinen KK, Makinen PL, Chen CY, Muhammad ZRes Microbiol10.1016/0923-2508(93)90016-u1993Aerobiosis, Anaerobiosis, Catalase/metabolism, Culture Media, Dental Plaque/*microbiology, Endopeptidases/*metabolism, Humans, In Vitro Techniques, Periodontitis/*microbiology, Peroxidases/metabolism, Superoxide Dismutase/*metabolism, Treponema/*enzymology/growth & development/isolation & purificationEnzymology
Phylogeny8494734Treponema denticola (ex Brumpt 1925) sp. nov., nom. rev., and identification of new spirochete isolates from periodontal pockets.Chan EC, Siboo R, Keng T, Psarra N, Hurley R, Cheng SL, Iugovaz IInt J Syst Bacteriol10.1099/00207713-43-2-1961993Agglutination Tests, DNA, Bacterial, Fatty Acids/analysis, Fluorescent Antibody Technique, Humans, Immunoblotting, Periodontal Pocket/*microbiology, Sequence Homology, Nucleic Acid, Serotyping, Treponema/*classification/immunology/*isolation & purification/ultrastructurePathogenicity
Metabolism8626313Sequence analysis, expression, and binding activity of recombinant major outer sheath protein (Msp) of Treponema denticola.Fenno JC, Muller KH, McBride BCJ Bacteriol10.1128/jb.178.9.2489-2497.19961996Amino Acid Sequence, Bacterial Outer Membrane Proteins/*genetics/*metabolism, *Bacterial Proteins, Base Sequence, Cloning, Molecular, DNA-Directed RNA Polymerases/genetics, Escherichia coli/genetics, Fibronectins/metabolism, Gene Expression, Genes, Bacterial/genetics, Laminin/metabolism, Molecular Sequence Data, Molecular Weight, Porins/chemistry/*genetics/isolation & purification/*metabolism, Promoter Regions, Genetic/genetics, Protein Binding, RNA, Bacterial/analysis, RNA, Messenger/analysis, Recombinant Fusion Proteins, Sequence Analysis, DNA, Treponema/*genetics, Viral ProteinsGenetics
Enzymology8641769Proline iminopeptidase from the outer cell envelope of the human oral spirochete Treponema denticola ATCC 35405.Makinen KK, Chen CY, Makinen PLInfect Immun10.1128/iai.64.3.702-708.19961996Amino Acid Sequence, Amino Acids/analysis, Aminopeptidases/chemistry/*isolation & purification/metabolism, Humans, Hydrogen-Ion Concentration, Molecular Sequence Data, Molecular Weight, Mouth/*microbiology, Substrate Specificity, Temperature, Treponema/*enzymologyPathogenicity
Genetics8655571Gene inactivation in the oral spirochete Treponema denticola: construction of an flgE mutant.Li H, Ruby J, Charon N, Kuramitsu HJ Bacteriol10.1128/jb.178.12.3664-3667.19961996Bacterial Proteins/*genetics, Base Sequence, DNA, Bacterial/genetics, Flagella/ultrastructure, *Genes, Bacterial, Microscopy, Electron, Molecular Sequence Data, *Mutagenesis, Insertional, Plasmids, Treponema/*genetics
Metabolism8757811The major surface protein complex of Treponema denticola depolarizes and induces ion channels in HeLa cell membranes.Mathers DA, Leung WK, Fenno JC, Hong Y, McBride BCInfect Immun10.1128/iai.64.8.2904-2910.19961996Anions/metabolism, *Bacterial Proteins, Cations/metabolism, Cell Membrane/*metabolism, Electric Conductivity, HeLa Cells, Humans, Patch-Clamp Techniques, Porins/chemistry/*metabolism, Protein Binding, Treponema, Treponemal Infections/etiologyPathogenicity
Enzymology8890484Iron acquisition by oral hemolytic spirochetes: isolation of a hemin-binding protein and identification of iron reductase activity.Scott D, Chan EC, Siboo RCan J Microbiol10.1139/m96-1371996Bacterial Outer Membrane Proteins/*isolation & purification, Biological Transport, Active, Carrier Proteins/*isolation & purification, Chromatography, Agarose, Culture Media/metabolism, Electrophoresis, Polyacrylamide Gel, *FMN Reductase, Hemin/metabolism/*pharmacokinetics, Iron/*metabolism/pharmacokinetics, Mouth/*microbiology, NADH, NADPH Oxidoreductases/*biosynthesis, Treponema/*enzymology/growth & development/*metabolismMetabolism
Metabolism8941769Hyaluronan, a possible ligand mediating Treponema denticola binding to periodontal tissue.Haapasalo M, Hannam P, McBride BC, Uitto VJOral Microbiol Immunol10.1111/j.1399-302x.1996.tb00351.x1996Animals, Bacterial Adhesion/drug effects/*physiology, Bacterial Outer Membrane Proteins/metabolism, Cells, Cultured, Chymotrypsin/antagonists & inhibitors/metabolism, Collagen/metabolism, Enzyme-Linked Immunosorbent Assay, Epithelial Cells, Epithelium/microbiology, Fibrinogen/metabolism/pharmacology, Glycosaminoglycans/metabolism/pharmacology, Hot Temperature, Humans, Hyaluronic Acid/*metabolism/pharmacology, Periodontal Ligament/cytology/*microbiology, Protein Binding, Rabbits, Swine, Treponema/drug effects/enzymology/*physiologyPathogenicity
Enzymology8945563Characterization of the Treponema denticola prtP gene encoding a prolyl-phenylalanine-specific protease (dentilisin).Ishihara K, Miura T, Kuramitsu HK, Okuda KInfect Immun10.1128/iai.64.12.5178-5186.19961996Amino Acid Sequence, Bacterial Proteins/*genetics/isolation & purification, Base Sequence, Chymotrypsin/*genetics, Cloning, Molecular, Genes, Bacterial/*genetics, Molecular Sequence Data, Peptide Hydrolases, *Serine Endopeptidases, Subtilisins/genetics, Treponema/enzymology/*geneticsGenetics
Enzymology9009331gamma-Glutamyltransferase from the outer cell envelope of Treponema denticola ATCC 35405.Makinen PL, Makinen KKInfect Immun10.1128/iai.65.2.685-691.19971997Amino Acid Sequence, Bacterial Outer Membrane Proteins/*chemistry/drug effects/isolation & purification, Chelating Agents/pharmacology, Chemical Phenomena, Chemistry, Physical, Chlorides/pharmacology, Electrophoresis, Polyacrylamide Gel, Enzyme Activation/drug effects, Hydrogen-Ion Concentration, Hydrolysis, Indicators and Reagents, Kinetics, Molecular Sequence Data, Substrate Specificity, Sulfhydryl Compounds/pharmacology, Transferases/metabolism, Treponema/chemistry/*enzymology, gamma-Glutamyltransferase/*chemistry/drug effects/isolation & purificationPathogenicity
Genetics9023187Conservation of msp, the gene encoding the major outer membrane protein of oral Treponema spp.Fenno JC, Wong GW, Hannam PM, Muller KH, Leung WK, McBride BCJ Bacteriol10.1128/jb.179.4.1082-1089.19971997Amino Acid Sequence, *Bacterial Proteins, Base Sequence, Blotting, Southern, Cell Membrane/ultrastructure, *Conserved Sequence, *Genes, Bacterial, Molecular Sequence Data, Polymerase Chain Reaction, Porins/analysis/chemistry/*genetics, Protein Structure, Secondary, Sequence Alignment, Sequence Homology, Nucleic Acid, Treponema/chemistry/*genetics/ultrastructure
Pathogenicity9169730Genetic and transcriptional analysis of flgB flagellar operon constituents in the oral spirochete Treponema denticola and their heterologous expression in enteric bacteria.Heinzerling HF, Olivares M, Burne RAInfect Immun10.1128/iai.65.6.2041-2051.19971997Amino Acid Sequence, Base Sequence, Escherichia coli/genetics, Flagella/*genetics, Humans, Immune Sera/immunology, Molecular Sequence Data, Mouth/*microbiology, Multigene Family, Open Reading Frames, *Operon, Promoter Regions, Genetic, Salmonella typhimurium/genetics, Transcription, Genetic, Treponema/*genetics/immunologyGenetics
Metabolism9227137Visualization of an extracellular mucoid layer of Treponema denticola ATCC 35405 and surface sugar lectin analysis of some Treponema species.Scott D, Klitorinos A, Chan EC, Siboo ROral Microbiol Immunol10.1111/j.1399-302x.1997.tb00628.x1997Bacterial Capsules/chemistry/*ultrastructure, Lectins/metabolism, Microscopy, Electron, Polysaccharides, Bacterial/*analysis/metabolism, Treponema/*chemistry/*ultrastructure
Genetics9317000Characterization of a methyl-accepting chemotaxis protein gene, dmcA, from the oral spirochete Treponema denticola.Kataoka M, Li H, Arakawa S, Kuramitsu HInfect Immun10.1128/iai.65.10.4011-4016.19971997Amino Acid Sequence, Bacterial Proteins/*genetics, Chemotaxis/*genetics, Escherichia coli/genetics, *Genes, Bacterial, Membrane Proteins/biosynthesis/*genetics, Methyl-Accepting Chemotaxis Proteins, Molecular Sequence Data, Mutagenesis, Insertional, Open Reading Frames/genetics, Recombinant Proteins/biosynthesis, Sequence Analysis, DNA, Sequence Homology, Amino Acid, Treponema/*geneticsTranscriptome
Enzymology9335294Identification, isolation, and characterization of the 42-kilodalton major outer membrane protein (MompA) from Treponema pectinovorum ATCC 33768.Walker SG, Ebersole JL, Holt SCJ Bacteriol10.1128/jb.179.20.6441-6447.19971997Amino Acid Sequence, Amino Acids/analysis, Antigens, Bacterial/immunology, Bacterial Outer Membrane Proteins/*chemistry/immunology/*isolation & purification, Blotting, Western, Cross Reactions, Detergents/pharmacology, Electrophoresis, Polyacrylamide Gel, Endopeptidases/metabolism, Microscopy, Immunoelectron, Molecular Sequence Data, Molecular Weight, Temperature, Treponema/*chemistry/ultrastructurePhylogeny
Metabolism9453629Filamentous actin disruption and diminished inositol phosphate response in gingival fibroblasts caused by Treponema denticola.Yang PF, Song M, Grove DA, Ellen RPInfect Immun10.1128/IAI.66.2.696-702.19981998Actins/*metabolism, Calcium/metabolism, Cell Membrane/physiology, Cells, Cultured, Fibroblasts/metabolism, Gingiva/*metabolism, Humans, Inositol Phosphates/*metabolism, Treponema/*physiologyPathogenicity
Enzymology9673024Mutagenesis of outer membrane virulence determinants of the oral spirochete Treponema denticola.Fenno JC, Wong GW, Hannam PM, McBride BCFEMS Microbiol Lett10.1111/j.1574-6968.1998.tb13047.x1998Alleles, *Bacterial Proteins, Blotting, Southern, Electrophoresis, Polyacrylamide Gel, Humans, Immunoblotting, Microscopy, Electron, Mutation, Periodontal Diseases/microbiology, Porins/*genetics, Serine Endopeptidases/*genetics/metabolism, Transformation, Bacterial, Treponema/enzymology/*genetics/*pathogenicity/ultrastructure, Virulence/*geneticsPathogenicity
Pathogenicity9916079Characterization of a novel methyl-accepting chemotaxis gene, dmcB, from the oral spirochete Treponema denticola.Li H, Arakawa S, Deng QD, Kuramitsu HInfect Immun10.1128/IAI.67.2.694-699.19991999Amino Acid Sequence, Base Sequence, Chemotaxis/*physiology, DNA, Bacterial, Escherichia coli, Gene Expression, Humans, Molecular Sequence Data, Mouth/microbiology, Mutagenesis, Open Reading Frames, Sequence Homology, Amino Acid, Transcription, Genetic, Treponema/*geneticsGenetics
Metabolism10024564Treponema denticola outer membrane enhances the phagocytosis of collagen-coated beads by gingival fibroblasts.Battikhi T, Lee W, McCulloch CA, Ellen RPInfect Immun10.1128/IAI.67.3.1220-1226.19991999Cell Membrane/physiology, Cell Survival, Collagen/*metabolism, Cytochalasin D/pharmacology, Fibroblasts/metabolism, Gingiva/cytology/*metabolism, Hot Temperature, Humans, Periodontal Diseases/microbiology, *Phagocytosis, Treponema/*physiologyStress
Metabolism10204483Oxygen metabolism by Treponema denticola.Caldwell CE, Marquis REOral Microbiol Immunol10.1034/j.1399-302x.1999.140109.x1999Anaerobiosis, Dental Plaque/metabolism/microbiology, Multienzyme Complexes/metabolism, NADH, NADPH Oxidoreductases/metabolism, Oxygen/metabolism, Oxygen Consumption, Peroxidases/metabolism, Superoxide Dismutase/metabolism, Treponema/*metabolismEnzymology
Phylogeny10347901Mitogenic activity of the outer membrane of Treponema denticola.Schade SZ, Yotis WW, Gopalsami C, Simonson LGMicrobios1998Animals, Cell Membrane/*chemistry, Lipopolysaccharides/analysis, Mice, Mice, Inbred C3H, Mitogens/*isolation & purification/pharmacology, Serotyping, Species Specificity, Spleen/cytology/drug effects, Sugar Acids/analysis, Treponema/*chemistry/classificationEnzymology
Pathogenicity10481082Molecular characterization of a flagellar (fla) operon in the oral spirochete Treponema denticola ATCC 35405.Stamm LV, Bergen HLFEMS Microbiol Lett10.1111/j.1574-6968.1999.tb08703.x1999Bacterial Proteins/genetics, Base Sequence, Humans, Mouth Mucosa/microbiology, Movement, *Operon, Restriction Mapping, Reverse Transcriptase Polymerase Chain Reaction, Sequence Alignment, Treponema/*genetics/isolation & purification/physiology, Treponema pallidum/geneticsEnzymology
Metabolism10722578Identification of a Treponema denticola OppA homologue that binds host proteins present in the subgingival environment.Fenno JC, Tamura M, Hannam PM, Wong GW, Chan RA, McBride BCInfect Immun10.1128/IAI.68.4.1884-1892.20002000Alleles, Amino Acid Sequence, Animals, Bacterial Adhesion, Bacterial Proteins, Blotting, Southern, Blotting, Western, Carrier Proteins/chemistry/genetics/*metabolism, Conserved Sequence, Epithelial Cells/metabolism, Escherichia coli/metabolism, Escherichia coli Proteins, Fibroblasts/metabolism, Gene Library, Gingiva/chemistry/*metabolism, Humans, Immunohistochemistry, Lipoproteins/chemistry/genetics/*metabolism, Microscopy, Electron, Molecular Sequence Data, Mutagenesis, Oligopeptides/metabolism, Protein Binding, Recombinant Fusion Proteins/metabolism, Sequence Homology, Amino Acid, Spirochaetales/metabolism, Swine, Treponema/chemistry/*metabolism/ultrastructurePathogenicity
Pathogenicity11075935Insertional inactivation of the prtP gene of Treponema denticola confirms dentilisin's disruption of epithelial junctions.Ellen RP, Ko KS, Lo CM, Grove DA, Ishihara KJ Mol Microbiol Biotechnol2000Bacterial Adhesion/genetics, Bacterial Proteins, Cell Division, Cell Membrane/genetics/ultrastructure, Chymotrypsin/*genetics/*metabolism, Drug Resistance, Microbial/genetics, Electric Impedance, Epithelial Cells/microbiology/physiology, Fibroblasts/microbiology/physiology/ultrastructure, Gingiva/microbiology/physiology/ultrastructure, Humans, Intercellular Junctions/*microbiology/*physiology, Kinetics, Mutagenesis, Insertional, Peptide Hydrolases, Periodontal Diseases/microbiology, Treponema/cytology/genetics/*physiology, Tumor Cells, CulturedEnzymology
Pathogenicity11553571Motility and chemotaxis in tissue penetration of oral epithelial cell layers by Treponema denticola.Lux R, Miller JN, Park NH, Shi WInfect Immun10.1128/IAI.69.10.6276-6283.20012001Anaerobiosis, Cell Line, Chemotaxis/*physiology, Epithelial Cells/cytology, Humans, Keratinocytes/cytology, Mouth Mucosa/cytology/*microbiology, Treponema/genetics/growth & development/pathogenicity/*physiology
Pathogenicity12472839Treponema denticola may stimulate both epithelial proliferation and apoptosis through MAP kinase signal pathways.Leung WK, Wu Q, Hannam PM, McBride BC, Uitto VJJ Periodontal Res10.1034/j.1600-0765.2002.01007.x2002Adenocarcinoma/pathology, Animals, Apoptosis/physiology, Blotting, Western, CHO Cells, Cell Adhesion/physiology, Cell Division/physiology, Cell Line, Cell Membrane/ultrastructure, Cell Size/physiology, Cell Survival/physiology, Cricetinae, DNA/biosynthesis, Epithelial Cells/pathology/physiology, Fibroblasts/physiology, Gingiva/cytology, Humans, In Situ Nick-End Labeling, *JNK Mitogen-Activated Protein Kinases, MAP Kinase Kinase 4, MAP Kinase Signaling System/*physiology, Microscopy, Electron, Mitogen-Activated Protein Kinase Kinases/physiology, Mitogen-Activated Protein Kinases/physiology, Osteosarcoma/pathology, Periodontal Ligament/cytology/*physiology, Treponema/*physiology, Tumor Cells, Cultured, p38 Mitogen-Activated Protein Kinases
Phylogeny12724370Genetic relatedness and phenotypic characteristics of Treponema associated with human periodontal tissues and ruminant foot disease.Edwards AM, Dymock D, Woodward MJ, Jenkinson HFMicrobiology (Reading)10.1099/mic.0.26111-02003Animals, Bacterial Adhesion, Bacterial Typing Techniques, Cattle, Cattle Diseases/microbiology, DNA, Ribosomal/analysis, Foot Diseases/microbiology/*veterinary, Humans, Molecular Sequence Data, Periodontal Diseases/*microbiology, Phylogeny, RNA, Ribosomal, 16S/genetics, Ruminants/*microbiology, Sequence Analysis, DNA, Sheep, Sheep Diseases/microbiology, Treponema/*classification/*genetics/pathogenicity, Treponemal Infections/*microbiology/veterinary, VirulencePathogenicity
Metabolism15064399Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes.Seshadri R, Myers GS, Tettelin H, Eisen JA, Heidelberg JF, Dodson RJ, Davidsen TM, DeBoy RT, Fouts DE, Haft DH, Selengut J, Ren Q, Brinkac LM, Madupu R, Kolonay J, Durkin SA, Daugherty SC, Shetty J, Shvartsbeyn A, Gebregeorgis E, Geer K, Tsegaye G, Malek J, Ayodeji B, Shatsman S, McLeod MP, Smajs D, Howell JK, Pal S, Amin A, Vashisth P, McNeill TZ, Xiang Q, Sodergren E, Baca E, Weinstock GM, Norris SJ, Fraser CM, Paulsen ITProc Natl Acad Sci U S A10.1073/pnas.03076391012004ATP-Binding Cassette Transporters/genetics, Bacterial Proteins/genetics, Base Sequence, Borrelia burgdorferi/genetics/metabolism, Genes, Bacterial/genetics, *Genome, Bacterial, Leptospira interrogans/genetics/metabolism, Models, Genetic, Molecular Sequence Data, Mouth/*microbiology, Sequence Homology, Amino Acid, Treponema/*genetics/metabolism/pathogenicity, Treponema pallidum/genetics/metabolismGenetics
Metabolism15256581Genetic analysis of Treponema denticola ATCC 35405 biofilm formation.Vesey PM, Kuramitsu HKMicrobiology (Reading)10.1099/mic.0.26816-02004Bacterial Proteins/*genetics/*metabolism, Biofilms/*growth & development, Chymotrypsin/genetics/metabolism, Colony Count, Microbial, Humans, Microscopy, Electron, Scanning, Mutation, Peptide Hydrolases, Porphyromonas gingivalis/growth & development, Treponema/genetics/*growth & developmentPathogenicity
Metabolism15271922Multiple functions of the leucine-rich repeat protein LrrA of Treponema denticola.Ikegami A, Honma K, Sharma A, Kuramitsu HKInfect Immun10.1128/IAI.72.8.4619-4627.20042004Amino Acid Sequence, Bacterial Adhesion, Bacterial Proteins/chemistry/genetics/metabolism, Base Sequence, Cell Line, Cloning, Molecular, Humans, Leucine-Rich Repeat Proteins, Molecular Sequence Data, Movement, Proteins/chemistry/genetics/*metabolism, Recombinant Proteins/genetics/metabolism, Repetitive Sequences, Amino Acid, Sequence Analysis, DNA, Treponema/genetics/metabolism/pathogenicity/*physiologyEnzymology
Metabolism15845495Binding properties and adhesion-mediating regions of the major sheath protein of Treponema denticola ATCC 35405.Edwards AM, Jenkinson HF, Woodward MJ, Dymock DInfect Immun10.1128/IAI.73.5.2891-2898.20052005*Bacterial Adhesion, Bacterial Proteins/*chemistry/genetics/*metabolism, Escherichia coli/genetics/metabolism, Fibronectins/metabolism, *Gene Expression Regulation, Bacterial, Humans, Porins/*chemistry/genetics/*metabolism, Proteins/*metabolism, Recombinant Proteins/genetics/metabolism, Treponema denticola/metabolism/*physiologyPathogenicity
Metabolism16815066Surface protease of Treponema denticola hydrolyzes C3 and influences function of polymorphonuclear leukocytes.Yamazaki T, Miyamoto M, Yamada S, Okuda K, Ishihara KMicrobes Infect10.1016/j.micinf.2006.02.0132006Bacterial Proteins, Cells, Cultured, Chymotrypsin/*physiology, Complement C3/*metabolism, Enzyme-Linked Immunosorbent Assay, Gene Deletion, Humans, Immunoblotting, Luminescent Measurements, Matrix Metalloproteinase 9/metabolism, Neutrophil Activation, Neutrophils/*immunology/metabolism, Oligopeptides/pharmacology, Peptide Hydrolases, Phagocytosis, Protease Inhibitors/pharmacology, Superoxides/metabolism, Treponema denticola/*enzymology/genetics, Virulence Factors/physiologyPathogenicity
Metabolism17187656Characterization of Treponema denticola pyrF encoding orotidine-5'-monophosphate decarboxylase.Capone RF, Ning Y, Pakulis N, Alhazzazi T, Fenno JCFEMS Microbiol Lett10.1111/j.1574-6968.2006.00589.x2006Bacterial Proteins/*genetics/*metabolism, Culture Media, Drug Resistance, Bacterial, Genetic Complementation Test, Mutation, Orotic Acid/*analogs & derivatives/pharmacology, Orotidine-5'-Phosphate Decarboxylase/genetics/*metabolism, Pyrimidines/biosynthesis, Treponema denticola/drug effects/*enzymology/growth & development, UracilCultivation
Pathogenicity17533151Treponema denticola induces interleukin-8 and macrophage chemoattractant protein 1 production in human umbilical vein epithelial cells.Okuda T, Kimizuka R, Miyamoto M, Kato T, Yamada S, Okuda K, Ishihara KMicrobes Infect10.1016/j.micinf.2007.03.0092007Bacterial Proteins, Chemokine CCL2/*biosynthesis/genetics/immunology, Chymotrypsin/metabolism, Endothelial Cells/immunology/microbiology, Epithelial Cells/immunology/microbiology, Humans, Interleukin-8/*biosynthesis/genetics/immunology, Peptide Hydrolases, Periodontitis/*immunology/microbiology, RNA/chemistry/genetics, Reverse Transcriptase Polymerase Chain Reaction, Treponema denticola/enzymology/*immunology, Umbilical Veins/cytologyBiotechnology
Metabolism17591786The chymotrypsin-like protease complex of Treponema denticola ATCC 35405 mediates fibrinogen adherence and degradation.Bamford CV, Fenno JC, Jenkinson HF, Dymock DInfect Immun10.1128/IAI.00258-072007Bacterial Adhesion/*physiology, Bacterial Proteins/antagonists & inhibitors/metabolism, Chymases/antagonists & inhibitors/*physiology, Chymotrypsin/antagonists & inhibitors/blood/*physiology, Fibrin Fibrinogen Degradation Products/antagonists & inhibitors/*metabolism/physiology, Fibrinogen/*metabolism/physiology, Hemostasis/*physiology, Humans, Multiprotein Complexes/antagonists & inhibitors/metabolism/physiology, Peptide Hydrolases, Porins/antagonists & inhibitors/metabolism, Treponema denticola/*enzymology/growth & development/physiologyPathogenicity
Metabolism17803630Steroid 5alpha-reductase activity of Treponema denticola.Clark DT, Soory MOral Microbiol Immunol10.1111/j.1399-302X.2007.00364.x20073-Oxo-5-alpha-Steroid 4-Dehydrogenase/*metabolism, Androstenedione/metabolism, Buffers, Carbon Radioisotopes, Cholestanol/metabolism, Cholesterol/metabolism, Chromatography, Thin Layer, Coenzymes, Corticosterone/metabolism, Enzyme Inhibitors/pharmacology, Ethanol/pharmacology, Humans, Hydrogen-Ion Concentration, NADP/metabolism, Progesterone/metabolism, Radiopharmaceuticals, Subcellular Fractions/enzymology, Substrate Specificity, Testosterone/metabolism, Time Factors, Treponema denticola/*enzymologyEnzymology
Enzymology18279185Human serum antibodies recognize Treponema denticola Msp and PrtP protease complex proteins.Capone R, Wang HT, Ning Y, Sweier DG, Lopatin DE, Fenno JCOral Microbiol Immunol10.1111/j.1399-302X.2007.00404.x2008Antibodies, Bacterial/blood/*immunology, Antigen-Antibody Reactions, Antigens, Bacterial/*immunology, Bacterial Outer Membrane Proteins/*immunology, Bacterial Proteins/*immunology, Blotting, Western, Chymotrypsin/*immunology, Electrophoresis, Polyacrylamide Gel, Humans, Immunoglobulin G/blood/physiology, Peptide Hydrolases, Porins/*immunology, Treponema denticola/*chemistry/*immunology, Virulence FactorsPathogenicity
Pathogenicity20380884Mixture of periodontopathogenic bacteria influences interaction with KB cells.Kirschbaum M, Schultze-Mosgau S, Pfister W, Eick SAnaerobe10.1016/j.anaerobe.2010.03.0092010*Bacterial Adhesion, Bacteroidetes/growth & development/*pathogenicity, Coculture Techniques, Epithelial Cells/immunology/*microbiology, Fusobacterium nucleatum/growth & development/*pathogenicity, Humans, Interleukins/*metabolism, KB Cells, Periodontal Diseases/*microbiology, Treponema denticola/growth & development/*pathogenicityMetabolism
Enzymology21602384Disruption of a type II endonuclease (TDE0911) enables Treponema denticola ATCC 35405 to accept an unmethylated shuttle vector.Bian J, Li CAppl Environ Microbiol10.1128/AEM.00417-112011DNA Restriction Enzymes/genetics/*metabolism, DNA, Bacterial/genetics/*metabolism, *Gene Knockout Techniques, Genetic Vectors, *Transformation, Bacterial, Treponema denticola/*enzymology/geneticsMetabolism
Enzymology23253337Conservation and revised annotation of the Treponema denticola prcB-prcA-prtP locus encoding the dentilisin (CTLP) protease complex.Goetting-Minesky MP, Godovikova V, Li JJ, Seshadrinathan S, Timm JC, Kamodia SS, Fenno JCMol Oral Microbiol10.1111/omi.120132012Bacterial Proteins/*genetics, Chymotrypsin/*genetics, Conserved Sequence, Databases, Genetic, Frameshift Mutation, Genetic Variation, Mutagenesis, Operon, Peptide Hydrolases/genetics, Subtilisins/genetics, Terminology as Topic, Treponema denticola/*enzymology/*genetics
Metabolism25152229Dentilisin involvement in coaggregation between Treponema denticola and Tannerella forsythia.Sano Y, Okamoto-Shibayama K, Tanaka K, Ito R, Shintani S, Yakushiji M, Ishihara KAnaerobe10.1016/j.anaerobe.2014.08.0082014*Bacterial Adhesion, Bacterial Proteins, Bacteroidetes/metabolism/*physiology, Chymotrypsin/*metabolism, Optical Imaging, Peptide Hydrolases, Protein Binding, Proteolysis, Spectrophotometry, Treponema denticola/metabolism/*physiology
25888173Kanamycin Resistance Cassette for Genetic Manipulation of Treponema denticola.Li Y, Ruby J, Wu HAppl Environ Microbiol10.1128/AEM.00478-152015Gene Targeting/*methods, Genetic Complementation Test, Genetics, Microbial/*methods, *Kanamycin Resistance, Molecular Biology/*methods, Selection, Genetic, Transformation, Genetic, Treponema denticola/*genetics
Pathogenicity26162875A Modified Shuttle Plasmid Facilitates Expression of a Flavin Mononucleotide-Based Fluorescent Protein in Treponema denticola ATCC 35405.Godovikova V, Goetting-Minesky MP, Shin JM, Kapila YL, Rickard AH, Fenno JCAppl Environ Microbiol10.1128/AEM.01541-152015Bacterial Proteins/genetics, Cells, Cultured, DNA Methylation, DNA, Bacterial/genetics, Deoxyribonucleases, Type II Site-Specific, Fibroblasts/microbiology, Flavin Mononucleotide/*genetics, Fluorescence, Genetic Vectors, Gingiva/cytology/microbiology, Humans, Luminescent Proteins/*genetics, *Plasmids, *Transformation, Bacterial, Treponema denticola/*genetics
27375574Genomic and Metagenomic Analysis of Diversity-Generating Retroelements Associated with Treponema denticola.Nimkulrat S, Lee H, Doak TG, Ye YFront Microbiol10.3389/fmicb.2016.008522016
Enzymology27422166Characterization of a potential ABC-type bacteriocin exporter protein from Treponema denticola.Tanaka-Kumazawa K, Kikuchi Y, Sano-Kokubun Y, Shintani S, Yakushiji M, Kuramitsu HK, Ishihara KBMC Oral Health10.1186/s12903-016-0243-72016ATP-Binding Cassette Transporters/*isolation & purification, Amino Acid Sequence, Bacterial Proteins, Bacteriocins/*metabolism, Treponema, Treponema denticola/*chemistryPhylogeny
Metabolism27914958Comparative analysis of motility and other properties of Treponema denticola strains.Nagano K, Hasegawa Y, Yoshida Y, Yoshimura FMicrob Pathog10.1016/j.micpath.2016.11.0212016*Bacterial Physiological Phenomena, Bacterial Proteins/chemistry/genetics/metabolism, Cell Line, Computational Biology/methods, Epithelial Cells/microbiology, Gene Expression Regulation, Bacterial, Gram-Negative Bacterial Infections/microbiology, Humans, In Vitro Techniques, Peptide Hydrolases/metabolism, Periodontal Diseases/microbiology, Phenotype, Transcription, Genetic, Treponema denticola/*physiology/ultrastructurePathogenicity
Phylogeny28453906Oral treponeme major surface protein: Sequence diversity and distributions within periodontal niches.You M, Chan Y, Lacap-Bugler DC, Huo YB, Gao W, Leung WK, Watt RMMol Oral Microbiol10.1111/omi.121852017Adult, Amino Acid Sequence, Bacterial Proteins/classification/*genetics, Cloning, Molecular, Cohort Studies, DNA, Bacterial/genetics, Dental Plaque/microbiology, Female, *Genetic Variation, Genotype, Hong Kong, Humans, Male, Membrane Proteins/classification/*genetics, Middle Aged, Multigene Family, Periodontitis/microbiology, Phylogeny, Porins/classification/*genetics, Protein Domains, Sequence Alignment, Sequence Analysis, Protein, Treponema/classification/*genetics, Treponema denticola/genetics, Virulence Factors/geneticsEnzymology
28748041Effect of azithromycin on a red complex polymicrobial biofilm.Ong HS, Oettinger-Barak O, Dashper SG, Darby IB, Tan KH, Reynolds ECJ Oral Microbiol10.1080/20002297.2017.13395792017
Pathogenicity30333370Treponema denticola Induces Epithelial Barrier Dysfunction in Polarized Epithelial Cells.Kikuchi Y, Kimizuka R, Kato T, Okuda K, Kokubu E, Ishihara KBull Tokyo Dent Coll10.2209/tdcpublication.2017-00522018Animals, Bacterial Proteins/genetics/*toxicity, Bacterial Toxins, Cell Survival/drug effects, Dogs, Electric Impedance, Epithelial Cells/*drug effects/*metabolism/microbiology/pathology, Humans, Intercellular Junctions/drug effects, Madin Darby Canine Kidney Cells/*drug effects/metabolism/microbiology, Occludin/*metabolism, Peptide Hydrolases/genetics/metabolism/*toxicity, Tight Junction Proteins/*metabolism, Treponema denticola/genetics/*metabolism/pathogenicity, Virulence Factors, Zonula Occludens-1 Protein/*metabolismMetabolism
Enzymology30373754Immunotopological Analysis of the Treponema denticola Major Surface Protein (Msp).Godovikova V, Goetting-Minesky MP, Timm JC, Fenno JCJ Bacteriol10.1128/JB.00528-182018Bacterial Proteins/*chemistry/genetics, Escherichia coli/enzymology/genetics, Membrane Proteins/*chemistry/genetics, Models, Molecular, Porins/*chemistry/genetics, Protein Conformation, Treponema denticola/*enzymology/genetics
33149843Investigation of the potential regulator proteins associated with the expression of major surface protein and dentilisin in Treponema denticola.Arai Y, Kikuchi Y, Okamoto-Shibayama K, Kokubu E, Shintani S, Ishihara KJ Oral Microbiol10.1080/20002297.2020.18294042020
34393436Identification of aspirin and diclofenac binding proteins in the red complex pathogens.Babu G, Priya VV, Krishnaa PK, Gayathri R, Priyadharsini JVBioinformation10.6026/973206300171922021
34675462Protein targets in the red complex organisms binding with an herbal compound silymarin.Faiz N, Pothapur KK, Vishnupriya V, Gayathri R, Priyadharsini JVBioinformation10.6026/973206300167592020
34803257Identification of protein targets in red complex organisms binding with resveratrol.Pothapur KK, Vishnu Priya V, Rengasamy G, Jayaseelan VPBioinformation10.6026/973206300168372020
35749516Characterization of a Treponema denticola ATCC 35405 mutant strain with mutation accumulation, including a lack of phage-derived genes.Yokogawa T, Nagano K, Fujita M, Miyakawa H, Iijima MPLoS One10.1371/journal.pone.02701982022Bacterial Proteins/genetics, Bacterial Typing Techniques, *Bacteriophages/genetics, Mutation Accumulation, Treponema/genetics, *Treponema denticola/genetics

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
5260Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 14222)https://www.dsmz.de/collection/catalogue/details/culture/DSM-14222
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg10.1093/nar/gkaa1025BRENDA, the ELIXIR core data resource in 2021: new developments and updatesNucleic Acids Res. 49: D498-D508 202033211880
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch10.21203/rs.3.rs-2527258/v1Predictions based on the model GenomeNet Sporulation v. 1
83489Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID41060.1StrainInfo: A central database for resolving microbial strain identifiers