Strain identifier
version 8.1 (current version)
General
@ref: 46924
BacDive-ID: 143401
keywords: Bacteria
description: Microbacterium sp. CCUG 18910 is a bacterium that was isolated from Human ear.
NCBI tax id
- NCBI tax id: 51671
- Matching level: species
doi: 10.13145/bacdive143401.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micrococcales
- family: Microbacteriaceae
- genus: Microbacterium
- species: Microbacterium sp.
- full scientific name: Microbacterium Orla-Jensen 1919 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Aureobacterium
@ref: 46924
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Micrococcales
family: Microbacteriaceae
genus: Microbacterium
species: Microbacterium sp.
type strain: no
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68379 | 17632 | nitrate | - | reduction |
| 68379 | 4853 | esculin | + | hydrolysis |
| 68379 | 16199 | urea | - | hydrolysis |
| 68379 | 5291 | gelatin | - | hydrolysis |
| 68379 | 17634 | D-glucose | + | fermentation |
| 68379 | 16988 | D-ribose | - | fermentation |
| 68379 | 65327 | D-xylose | + | fermentation |
| 68379 | 16899 | D-mannitol | + | fermentation |
| 68379 | 17306 | maltose | + | fermentation |
| 68379 | 17716 | lactose | - | fermentation |
| 68379 | 17992 | sucrose | + | fermentation |
| 68379 | 28087 | glycogen | - | fermentation |
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68379 | catalase | - | 1.11.1.6 |
| 68379 | gelatinase | - | |
| 68379 | urease | - | 3.5.1.5 |
| 68379 | beta-glucosidase | + | 3.2.1.21 |
| 68379 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
| 68379 | alpha-glucosidase | + | 3.2.1.20 |
| 68379 | beta-galactosidase | + | 3.2.1.23 |
| 68379 | beta-glucuronidase | - | 3.2.1.31 |
| 68379 | alkaline phosphatase | - | 3.1.3.1 |
| 68379 | pyrrolidonyl arylamidase | + | 3.4.19.3 |
| 68379 | pyrazinamidase | + | 3.5.1.B15 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 46924 C16:0 4.2 16 46924 C18:0 0.7 18 46924 C15:0 ANTEISO 55 14.711 46924 C15:0 ISO 9.2 14.621 46924 C16:0 iso 10 15.626 46924 C17:0 anteiso 18 16.722 46924 C17:0 iso 1.7 16.629 46924 C18:2 ω6,9c/C18:0 ANTE 1.1 17.724 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API coryne
| @ref | NIT | PYZ | PYRA | PAL | beta GUR | beta GAL | alpha GLU | beta NAG | ESC | URE | GEL | Control | GLU | RIB | XYL | MAN | MAL | LAC | SAC | GLYG | CAT |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46924 | - | + | + | - | - | + | + | + | + | - | - | - | + | - | + | + | + | - | + | - | - |
Isolation, sampling and environmental information
isolation
- @ref: 46924
- sample type: Human ear
- sampling date: 1986-05-28
- geographic location: Göteborg
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | |
| #Host Body-Site | #Organ | #Ear |
External links
@ref: 46924
culture collection no.: CCUG 18910
straininfo link
- @ref: 98771
- straininfo: 55262
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 46924 | Curators of the CCUG | https://www.ccug.se/strain?id=18910 | Culture Collection University of Gothenburg (CCUG) (CCUG 18910) | |
| 68379 | Automatically annotated from API Coryne | |||
| 98771 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID55262.1 |