Strain identifier

BacDive ID: 14326

Type strain: Yes

Species: Spirochaeta asiatica

Strain Designation: Z-7591

Strain history: <- T. Zhilina, strain Z-7591

NCBI tax ID(s): 46357 (species)

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General

@ref: 3435

BacDive-ID: 14326

DSM-Number: 8901

keywords: 16S sequence, Bacteria, mesophilic

description: Spirochaeta asiatica Z-7591 is a mesophilic bacterium of the family Spirochaetaceae.

NCBI tax id

  • NCBI tax id: 46357
  • Matching level: species

strain history

  • @ref: 3435
  • history: <- T. Zhilina, strain Z-7591

doi: 10.13145/bacdive14326.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/spirochaetota
  • domain: Bacteria
  • phylum: Spirochaetota
  • class: Spirochaetia
  • order: Spirochaetales
  • family: Spirochaetaceae
  • genus: Spirochaeta
  • species: Spirochaeta asiatica
  • full scientific name: Spirochaeta asiatica Zhilina et al. 1996

@ref: 3435

domain: Bacteria

phylum: Spirochaetes

class: Spirochaetia

order: Spirochaetales

family: Spirochaetaceae

genus: Spirochaeta

species: Spirochaeta asiatica

full scientific name: Spirochaeta asiatica Zhilina et al. 1996

strain designation: Z-7591

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
3435SPIROCHAETA DISSIPATITROPHA MEDIUM (DSMZ Medium 1263)yeshttps://mediadive.dsmz.de/medium/1263Name: SPIROCHAETA DISSIPATITROPHA MEDIUM (DSMZ Medium 1263) Composition: NaHCO3 24.0 g/l Cellobiose 5.0 g/l Na2CO3 2.76 g/l NH4Cl 1.0 g/l Yeast extract 0.5 g/l Na2S x 9 H2O 0.4 g/l K2HPO4 0.2 g/l KCl 0.2 g/l MgCl2 x 6 H2O 0.1 g/l MgSO4 x 7 H2O 0.03 g/l Nitrilotriacetic acid 0.015 g/l NaCl 0.01 g/l MnSO4 x H2O 0.005 g/l CoSO4 x 7 H2O 0.0018 g/l ZnSO4 x 7 H2O 0.0018 g/l FeSO4 x 7 H2O 0.001 g/l CaCl2 x 2 H2O 0.001 g/l Sodium resazurin 0.0005 g/l NiCl2 x 6 H2O 0.0003 g/l AlK(SO4)2 x 12 H2O 0.0002 g/l H3BO3 0.0001 g/l Na2MoO4 x 2 H2O 0.0001 g/l CuSO4 x 5 H2O 0.0001 g/l Pyridoxine hydrochloride 2e-05 g/l Riboflavin 1e-05 g/l (DL)-alpha-Lipoic acid 1e-05 g/l p-Aminobenzoic acid 1e-05 g/l Calcium D-(+)-pantothenate 1e-05 g/l Nicotinic acid 1e-05 g/l Thiamine HCl 1e-05 g/l Folic acid 4e-06 g/l Biotin 4e-06 g/l Na2WO4 x 2 H2O 4e-06 g/l Na2SeO3 x 5 H2O 3e-06 g/l Vitamin B12 2e-07 g/l Distilled water
3435ALKALIPHILIC SPIROCHAETE MEDIUM (DSMZ Medium 700)yeshttps://mediadive.dsmz.de/medium/700Name: ALKALIPHILIC SPIROCHAETE MEDIUM (DSMZ Medium 700) Composition: NaHCO3 15.0 g/l Na2CO3 10.0 g/l Sucrose 5.0 g/l Na2S x 9 H2O 1.0 g/l NH4Cl 1.0 g/l Yeast extract 0.5 g/l K2HPO4 0.2 g/l KCl 0.2 g/l MgSO4 x 7 H2O 0.003 g/l Nitrilotriacetic acid 0.0015 g/l NaCl 0.001 g/l MnSO4 x H2O 0.0005 g/l CoSO4 x 7 H2O 0.00018 g/l ZnSO4 x 7 H2O 0.00018 g/l FeSO4 x 7 H2O 0.0001 g/l Pyridoxine hydrochloride 0.0001 g/l CaCl2 x 2 H2O 0.0001 g/l Calcium D-(+)-pantothenate 5e-05 g/l (DL)-alpha-Lipoic acid 5e-05 g/l Nicotinic acid 5e-05 g/l Riboflavin 5e-05 g/l Thiamine HCl 5e-05 g/l p-Aminobenzoic acid 5e-05 g/l NiCl2 x 6 H2O 3e-05 g/l Biotin 2e-05 g/l Folic acid 2e-05 g/l AlK(SO4)2 x 12 H2O 2e-05 g/l CuSO4 x 5 H2O 1e-05 g/l H3BO3 1e-05 g/l Na2MoO4 x 2 H2O 1e-05 g/l Vitamin B12 1e-06 g/l Na2WO4 x 2 H2O 4e-07 g/l Na2SeO3 x 5 H2O 3e-07 g/l Distilled water

culture temp

  • @ref: 3435
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 3435
  • geographic location: Lake Khadyn
  • country: Central Asia
  • origin.country: RUS
  • continent: Asia

taxonmaps

  • @ref: 69479
  • File name: preview.99_157433.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_16673;96_2649;97_76879;98_103756;99_157433&stattab=map
  • Last taxonomy: Spirochaeta
  • 16S sequence: X93926
  • Sequence Identity:
  • Total samples: 160
  • soil counts: 17
  • aquatic counts: 139
  • animal counts: 3
  • plant counts: 1

Safety information

risk assessment

  • @ref: 3435
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 3435
  • description: S.asiatica 16S ribosomal RNA
  • accession: X93926
  • length: 1469
  • database: ena
  • NCBI tax ID: 46357

External links

@ref: 3435

culture collection no.: DSM 8901

straininfo link

  • @ref: 83474
  • straininfo: 43850

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny8573509Spirochaeta alkalica sp. nov., Spirochaeta africana sp. nov., and Spirochaeta asiatica sp. nov., alkaliphilic anaerobes from the Continental Soda Lakes in Central Asia and the East African Rift.Zhilina TN, Zavarzin GA, Rainey F, Kevbrin VV, Kostrikina NA, Lysenko AMInt J Syst Bacteriol10.1099/00207713-46-1-3051996Africa, Eastern, Asia, Central, Bacteria, Anaerobic/classification/isolation & purification/ultrastructure, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Spirochaeta/*classification/isolation & purification/ultrastructure, Water MicrobiologyEnzymology
Phylogeny19578151Spirochaeta dissipatitropha sp. nov., an alkaliphilic, obligately anaerobic bacterium, and emended description of the genus Spirochaeta Ehrenberg 1835.Pikuta EV, Hoover RB, Bej AK, Marsic D, Whitman WB, Krader PInt J Syst Evol Microbiol10.1099/ijs.0.65862-02009Anaerobiosis, Bacterial Typing Techniques, Base Composition, California, DNA, Bacterial/analysis, Fatty Acids/analysis, Fresh Water/*microbiology, Genes, rRNA, Genotype, Geologic Sediments/*microbiology, Hydrogen-Ion Concentration, Molecular Sequence Data, Nucleic Acid Hybridization, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Species Specificity, Spirochaeta/*classification/genetics/isolation & purification/physiologyGenetics
Phylogeny25487950Spirochaeta lutea sp. nov., isolated from marine habitats and emended description of the genus Spirochaeta.Shivani Y, Subhash Y, Tushar L, Sasikala Ch, Ramana ChVSyst Appl Microbiol10.1016/j.syapm.2014.11.0022014Bacteriocins/metabolism, Base Composition, Carotenoids/metabolism, Cluster Analysis, Cytosol/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Environmental Microbiology, Fatty Acids/analysis, Genome, Bacterial, India, Metabolic Networks and Pathways/genetics, Molecular Sequence Data, Phospholipids/analysis, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Spirochaeta/*classification/genetics/*isolation & purification, Terpenes/metabolismGenetics

Reference

@idauthorscataloguedoi/urltitle
3435Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 8901)https://www.dsmz.de/collection/catalogue/details/culture/DSM-8901
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
83474Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID43850.1StrainInfo: A central database for resolving microbial strain identifiers