Strain identifier

BacDive ID: 143246

Type strain: No

Species: Janthinobacterium lividum

NCBI tax ID(s): 29581 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 46737

BacDive-ID: 143246

keywords: Bacteria, aerobe, mesophilic

description: Janthinobacterium lividum CCUG 18004 is an aerobe, mesophilic bacterium that was isolated from Coastal water surface.

NCBI tax id

  • NCBI tax id: 29581
  • Matching level: species

doi: 10.13145/bacdive143246.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Oxalobacteraceae
  • genus: Janthinobacterium
  • species: Janthinobacterium lividum
  • full scientific name: Janthinobacterium lividum (Eisenberg 1891) De Ley et al. 1978 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Pseudomonas mephitica
    20215Bacillus lividus

@ref: 46737

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Oxalobacteraceae

genus: Janthinobacterium

species: Janthinobacterium lividum

type strain: no

Culture and growth conditions

culture temp

@refgrowthtypetemperaturerange
46737nogrowth37mesophilic
46737positivegrowth20-25

Physiology and metabolism

oxygen tolerance

  • @ref: 46737
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate-assimilation
6836917128adipate-assimilation
6836927689decanoate-assimilation
6836924265gluconate-assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose-assimilation
683695291gelatin+hydrolysis
683694853esculin+hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate-reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase+
68369beta-glucosidase+3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase-3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    46737C10:00.210
    46737C13:00.213
    46737C14:0414
    46737C15:0215
    46737C16:021.716
    46737C17:00.617
    46737C18:00.418
    46737C10:0 3OH0.711.423
    46737C11:0 2OH0.112.158
    46737C11:0 3OH0.412.441
    46737C11:0 ISO 3OH1.512.09
    46737C12:0 ISO 3OH0.913.098
    46737C12:1 3OH2.413.289
    46737C13:0 ISO 2OH2.613.814
    46737C14:0 ISO0.313.618
    46737C14:1 ω5c0.213.899
    46737C15:0 ANTEISO0.414.711
    46737C15:1 ω6c0.314.856
    46737C15:1 ω8c1.714.792
    46737C16:0 iso2.515.626
    46737C16:1 ω5c0.215.908
    46737C16:1 ω7c47.515.819
    46737C16:1 ω9c0.715.774
    46737C17:0 anteiso0.216.722
    46737C17:0 iso0.216.629
    46737C17:1 ω8c2.316.792
    46737C18:1 ω7c /12t/9t3.117.824
    46737unknown 11.7982.511.798
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
46737-+++-+-----------+--

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
46737-----++-------------+

Isolation, sampling and environmental information

isolation

  • @ref: 46737
  • sample type: Coastal water surface
  • sampling date: 1985-06-01
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Coast
#Environmental#Aquatic#Surface water

External links

@ref: 46737

culture collection no.: CCUG 18004

straininfo link

  • @ref: 98633
  • straininfo: 3036

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
46737Curators of the CCUGhttps://www.ccug.se/strain?id=18004Culture Collection University of Gothenburg (CCUG) (CCUG 18004)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
98633Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID3036.1