Strain identifier
version 8.1 (current version)
General
@ref: 46737
BacDive-ID: 143246
keywords: Bacteria, aerobe, mesophilic
description: Janthinobacterium lividum CCUG 18004 is an aerobe, mesophilic bacterium that was isolated from Coastal water surface.
NCBI tax id
- NCBI tax id: 29581
- Matching level: species
doi: 10.13145/bacdive143246.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Oxalobacteraceae
- genus: Janthinobacterium
- species: Janthinobacterium lividum
- full scientific name: Janthinobacterium lividum (Eisenberg 1891) De Ley et al. 1978 (Approved Lists 1980)
synonyms
@ref synonym 20215 Pseudomonas mephitica 20215 Bacillus lividus
@ref: 46737
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Oxalobacteraceae
genus: Janthinobacterium
species: Janthinobacterium lividum
type strain: no
Culture and growth conditions
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
46737 | no | growth | 37 | mesophilic |
46737 | positive | growth | 20-25 |
Physiology and metabolism
oxygen tolerance
- @ref: 46737
- oxygen tolerance: aerobe
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68369 | 25115 | malate | - | assimilation |
68369 | 17128 | adipate | - | assimilation |
68369 | 27689 | decanoate | - | assimilation |
68369 | 24265 | gluconate | - | assimilation |
68369 | 17306 | maltose | - | assimilation |
68369 | 59640 | N-acetylglucosamine | - | assimilation |
68369 | 16899 | D-mannitol | - | assimilation |
68369 | 16024 | D-mannose | - | assimilation |
68369 | 30849 | L-arabinose | - | assimilation |
68369 | 17634 | D-glucose | - | assimilation |
68369 | 5291 | gelatin | + | hydrolysis |
68369 | 4853 | esculin | + | hydrolysis |
68369 | 16199 | urea | - | hydrolysis |
68369 | 29016 | arginine | - | hydrolysis |
68369 | 17634 | D-glucose | - | fermentation |
68369 | 27897 | tryptophan | - | energy source |
68369 | 17632 | nitrate | - | reduction |
metabolite production
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
@ref | value | activity | ec |
---|---|---|---|
68369 | cytochrome oxidase | + | 1.9.3.1 |
68369 | gelatinase | + | |
68369 | beta-glucosidase | + | 3.2.1.21 |
68369 | urease | - | 3.5.1.5 |
68369 | arginine dihydrolase | - | 3.5.3.6 |
68382 | alkaline phosphatase | + | 3.1.3.1 |
68382 | esterase (C 4) | + | |
68382 | esterase lipase (C 8) | + | |
68382 | lipase (C 14) | - | |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | valine arylamidase | - | |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | trypsin | - | 3.4.21.4 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | acid phosphatase | - | 3.1.3.2 |
68382 | naphthol-AS-BI-phosphohydrolase | - | |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | alpha-glucosidase | - | 3.2.1.20 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 46737 C10:0 0.2 10 46737 C13:0 0.2 13 46737 C14:0 4 14 46737 C15:0 2 15 46737 C16:0 21.7 16 46737 C17:0 0.6 17 46737 C18:0 0.4 18 46737 C10:0 3OH 0.7 11.423 46737 C11:0 2OH 0.1 12.158 46737 C11:0 3OH 0.4 12.441 46737 C11:0 ISO 3OH 1.5 12.09 46737 C12:0 ISO 3OH 0.9 13.098 46737 C12:1 3OH 2.4 13.289 46737 C13:0 ISO 2OH 2.6 13.814 46737 C14:0 ISO 0.3 13.618 46737 C14:1 ω5c 0.2 13.899 46737 C15:0 ANTEISO 0.4 14.711 46737 C15:1 ω6c 0.3 14.856 46737 C15:1 ω8c 1.7 14.792 46737 C16:0 iso 2.5 15.626 46737 C16:1 ω5c 0.2 15.908 46737 C16:1 ω7c 47.5 15.819 46737 C16:1 ω9c 0.7 15.774 46737 C17:0 anteiso 0.2 16.722 46737 C17:0 iso 0.2 16.629 46737 C17:1 ω8c 2.3 16.792 46737 C18:1 ω7c /12t/9t 3.1 17.824 46737 unknown 11.798 2.5 11.798 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
46737 | - | + | + | + | - | + | - | - | - | - | - | - | - | - | - | - | - | + | - | - |
API 20NE
@ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
46737 | - | - | - | - | - | + | + | - | - | - | - | - | - | - | - | - | - | - | - | - | + |
Isolation, sampling and environmental information
isolation
- @ref: 46737
- sample type: Coastal water surface
- sampling date: 1985-06-01
- geographic location: Göteborg
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Terrestrial | #Coast |
#Environmental | #Aquatic | #Surface water |
External links
@ref: 46737
culture collection no.: CCUG 18004
straininfo link
- @ref: 98633
- straininfo: 3036
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
46737 | Curators of the CCUG | https://www.ccug.se/strain?id=18004 | Culture Collection University of Gothenburg (CCUG) (CCUG 18004) | |
68369 | Automatically annotated from API 20NE | |||
68382 | Automatically annotated from API zym | |||
98633 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID3036.1 |