Strain identifier
BacDive ID: 14304
Type strain: 
Species: Borrelia hermsii
Strain Designation: HS1
Strain history: <- V. Preac-Mursic <- R.C. Johnson <- H.G. Stoenner <- W. Burgdorfer
NCBI tax ID(s): 140 (species)
version 8.1 (current version)
General
@ref: 1971
BacDive-ID: 14304
DSM-Number: 5251
keywords: genome sequence, Bacteria, mesophilic
description: Borrelia hermsii HS1 is a mesophilic bacterium of the family Borreliaceae.
NCBI tax id
- NCBI tax id: 140
- Matching level: species
strain history
- @ref: 1971
- history: <- V. Preac-Mursic <- R.C. Johnson <- H.G. Stoenner <- W. Burgdorfer
doi: 10.13145/bacdive14304.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/spirochaetota
- domain: Bacteria
- phylum: Spirochaetota
- class: Spirochaetia
- order: Spirochaetales
- family: Borreliaceae
- genus: Borrelia
- species: Borrelia hermsii
- full scientific name: Borrelia hermsii (Davis 1942) Steinhaus 1946 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Spirochaeta hermsi
@ref: 1971
domain: Bacteria
phylum: Spirochaetes
class: Spirochaetia
order: Spirochaetales
family: Borreliaceae
genus: Borrelia
species: Borrelia hermsii
full scientific name: Borrelia hermsii (Davis 1942) Steinhaus 1946
strain designation: HS1
type strain: no
Culture and growth conditions
culture medium
- @ref: 1971
- name: BSK-MEDIUM (DSMZ Medium 403)
- growth: yes
- link: https://mediadive.dsmz.de/medium/403
- composition: Name: BSK-MEDIUM (DSMZ Medium 403) Composition: Bovine serum albumin 35.0245 g/l Gelatine 9.79706 g/l HEPES buffer 4.19874 g/l Proteose peptone no. 2 3.49895 g/l Glucose 2.09937 g/l Proteose yeastolate 0.69979 g/l Tryptone peptone 0.69979 g/l Na-pyruvate 0.559832 g/l Sodium citrate 0.489853 g/l N-Acetylglucosamine 0.279916 g/l MgCl2 x 6 H2O 0.209937 g/l L-Glutamine 0.069979 g/l Double distilled water CMRL 1066 Rabbit serum
culture temp
- @ref: 1971
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Safety information
risk assessment
- @ref: 1971
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Borrelia hermsii HS1 | GCA_001660005 | complete | ncbi | 1867252 |
| 66792 | Borrelia hermsii HS1 | 314723.6 | complete | patric | 314723 |
| 66792 | Borrelia hermsii HS1 | 2721755543 | complete | img | 1867252 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| flagellated | no | 90.395 | no |
| gram-positive | no | 93.47 | no |
| anaerobic | no | 93.356 | no |
| aerobic | no | 97.43 | no |
| halophile | yes | 65.712 | no |
| spore-forming | no | 97.349 | no |
| glucose-util | yes | 79.135 | no |
| motile | yes | 87.015 | no |
| thermophile | no | 88.311 | yes |
| glucose-ferment | yes | 70.614 | no |
External links
@ref: 1971
culture collection no.: DSM 5251, DSM 4682
straininfo link
- @ref: 83457
- straininfo: 47864
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 1971 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 5251) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-5251 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
| 83457 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID47864.1 | StrainInfo: A central database for resolving microbial strain identifiers |