Strain identifier

BacDive ID: 142751

Type strain: No

Species: Capnocytophaga granulosa

NCBI tax ID(s): 45242 (species)

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General

@ref: 46101

BacDive-ID: 142751

keywords: Bacteria

description: Capnocytophaga granulosa CCUG 14446 is a bacterium that was isolated from Human oral cavity.

NCBI tax id

  • NCBI tax id: 45242
  • Matching level: species

doi: 10.13145/bacdive142751.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Flavobacteriaceae
  • genus: Capnocytophaga
  • species: Capnocytophaga granulosa
  • full scientific name: Capnocytophaga granulosa Yamamoto et al. 1994

@ref: 46101

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Capnocytophaga

species: Capnocytophaga granulosa

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837727897tryptophan-energy source
6837716199urea-hydrolysis
6837718257ornithine-degradation
6837717306maltose+builds acid from
6837717992sucrose+builds acid from
6837717634D-glucose+builds acid from
6837715824D-fructose-builds acid from

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase+3.2.1.21
68382alpha-glucosidase+3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase+3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin-3.4.21.4
68382cystine arylamidase+3.4.11.3
68382valine arylamidase+
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
68377beta-lactamase-3.5.2.6
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase+2.3.2.2
68377proline-arylamidase+3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    46101C14:00.714
    46101C16:02.816
    46101C18:0118
    46101C13:0 iso0.912.612
    46101C13:1 at 12-130.712.931
    46101C15:0 ANTEISO1.614.711
    46101C15:0 ISO7014.621
    46101C15:0 ISO 3OH2.416.135
    46101C16:0 3OH3.117.52
    46101C16:1 ω7c0.515.819
    46101C17:0 iso 3OH818.161
    46101C18:1 ω9c2.517.769
    46101C18:2 ω6,9c/C18:0 ANTE2.417.724
    46101unknown 13.566313.566
    46101unknown 16.5800.516.58
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
46101-+++-+++--++-+-++---

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
46101-+-++---++++-

Isolation, sampling and environmental information

isolation

  • @ref: 46101
  • sample type: Human oral cavity
  • sampling date: 1983
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Oral cavity and airways
#Host Body-Site#Oral cavity and airways#Mouth

External links

@ref: 46101

culture collection no.: CCUG 14446, LMG 11506

straininfo link

  • @ref: 98206
  • straininfo: 7599

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
46101Curators of the CCUGhttps://www.ccug.se/strain?id=14446Culture Collection University of Gothenburg (CCUG) (CCUG 14446)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
98206Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID7599.1