Strain identifier

BacDive ID: 142541

Type strain: No

Species: Plesiomonas shigelloides

NCBI tax ID(s): 703 (species)

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General

@ref: 45852

BacDive-ID: 142541

keywords: Bacteria

description: Plesiomonas shigelloides CCUG 12890 is a bacterium that was isolated from Human acute cholecystitis,58-yr-old female.

NCBI tax id

  • NCBI tax id: 703
  • Matching level: species

doi: 10.13145/bacdive142541.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Enterobacteriaceae
  • genus: Plesiomonas
  • species: Plesiomonas shigelloides
  • full scientific name: Plesiomonas shigelloides corrig. (Bader 1954) Habs and Schubert 1962 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Pseudomonas shigelloides
    20215Pleisomonas shigelloides

@ref: 45852

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacterales

family: Enterobacterales, not assigned to family

genus: Plesiomonas

species: Plesiomonas shigelloides

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate-assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine+hydrolysis
6836917634D-glucose+fermentation
6836927897tryptophan+energy source
6836917632nitrate+reduction
6836830849L-arabinose-fermentation
6836827613amygdalin-fermentation
6836828053melibiose-fermentation
6836817992sucrose-fermentation
6836862345L-rhamnose-fermentation
6836830911sorbitol-fermentation
6836817268myo-inositol+fermentation
6836816899D-mannitol-fermentation
6836817634D-glucose+fermentation
683685291gelatin-hydrolysis
6836827897tryptophan+energy source
6836816199urea-hydrolysis
6836816947citrate-assimilation
6836818257ornithine+degradation
6836825094lysine+degradation
6836829016arginine+hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
6836935581indoleyes
6836815688acetoinno
6836835581indoleyes
6836816136hydrogen sulfideno

metabolite tests

@refChebi-IDmetaboliteindole testvoges-proskauer-test
6836935581indole+
6836815688acetoin-
6836835581indole+

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase+3.5.3.6
68368cytochrome oxidase+1.9.3.1
68368gelatinase-
68368tryptophan deaminase-4.1.99.1
68368urease-3.5.1.5
68368ornithine decarboxylase+4.1.1.17
68368lysine decarboxylase+4.1.1.18
68368arginine dihydrolase+3.5.3.6
68368beta-galactosidase+3.2.1.23

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOX
45852++++----+--+-+------+

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
45852++++---++---+-++-+--+

Isolation, sampling and environmental information

isolation

  • @ref: 45852
  • sample type: Human acute cholecystitis,58-yr-old female
  • sampling date: 1982-10-25
  • geographic location: Skövde
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Female
#Host Body-Site#Organ
#Infection#Inflammation
#Infection#Patient

External links

@ref: 45852

culture collection no.: CCUG 12890

straininfo link

  • @ref: 98015
  • straininfo: 6891

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
45852Curators of the CCUGhttps://www.ccug.se/strain?id=12890Culture Collection University of Gothenburg (CCUG) (CCUG 12890)
68368Automatically annotated from API 20E
68369Automatically annotated from API 20NE
98015Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID6891.1