Strain identifier

BacDive ID: 142514

Type strain: No

Species: Streptococcus pyogenes

NCBI tax ID(s): 1314 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 45815

BacDive-ID: 142514

keywords: genome sequence, Bacteria

description: Streptococcus pyogenes CCUG 12753 is a bacterium that was isolated from Human skin lesions.

NCBI tax id

  • NCBI tax id: 1314
  • Matching level: species

doi: 10.13145/bacdive142514.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Streptococcaceae
  • genus: Streptococcus
  • species: Streptococcus pyogenes
  • full scientific name: Streptococcus pyogenes Rosenbach 1884 (Approved Lists 1980)

@ref: 45815

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Streptococcaceae

genus: Streptococcus

species: Streptococcus pyogenes

type strain: no

Morphology

cell morphology

@refmotilityconfidencegram stain
69480no91.537
69480100positive

Physiology and metabolism

spore formation

@refspore formationconfidence
69481no100
69480no99.992

Isolation, sampling and environmental information

isolation

  • @ref: 45815
  • sample type: Human skin lesions

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Other#Wound
#Host Body-Site#Organ#Skin, Nail, Hair
#Infection#Patient

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Streptococcus pyogenes NCTC10871GCA_900459815contigncbi1314
66792Streptococcus pyogenes strain NCTC108711314.807wgspatric1314

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
motileno96.339no
gram-positiveyes92.772no
anaerobicno97.081no
halophileyes86.661no
spore-formingno96.068no
glucose-utilyes87.871no
flagellatedno98.687no
thermophileno99.059no
aerobicno94.383no
glucose-fermentyes81.145no

External links

@ref: 45815

culture collection no.: CCUG 12753, NCTC 10871

straininfo link

  • @ref: 97995
  • straininfo: 57977

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
45815Curators of the CCUGhttps://www.ccug.se/strain?id=12753Culture Collection University of Gothenburg (CCUG) (CCUG 12753)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1
97995Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID57977.1