Strain identifier

BacDive ID: 142454

Type strain: No

Species: Aggregatibacter actinomycetemcomitans

NCBI tax ID(s): 714 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 45751

BacDive-ID: 142454

keywords: genome sequence, Bacteria, microaerophile, mesophilic

description: Aggregatibacter actinomycetemcomitans CCUG 12604 is a microaerophile, mesophilic bacterium that was isolated from Human blood,72-yr-old woman,clinical endocarditis.

NCBI tax id

  • NCBI tax id: 714
  • Matching level: species

doi: 10.13145/bacdive142454.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Aggregatibacter
  • species: Aggregatibacter actinomycetemcomitans
  • full scientific name: Aggregatibacter actinomycetemcomitans (Klinger 1912) Nørskov-Lauritsen and Kilian 2006
  • synonyms

    @refsynonym
    20215Bacterium actinomycetemcomitans
    20215Haemophilus actinomycetemcomitans
    20215Actinobacillus actinomycetemcomitans

@ref: 45751

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Aggregatibacter

species: Aggregatibacter actinomycetemcomitans

type strain: no

Culture and growth conditions

culture temp

  • @ref: 45751
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 45751
  • oxygen tolerance: microaerophile

Isolation, sampling and environmental information

isolation

  • @ref: 45751
  • sample type: Human blood,72-yr-old woman,clinical endocarditis
  • sampling date: 1982-08-24
  • geographic location: Halmstad
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Female
#Host Body Product#Fluids#Blood
#Infection#Inflammation
#Infection#Patient

Sequence information

Genome sequences

  • @ref: 66792
  • description: Aggregatibacter actinomycetemcomitans strain HK_1002
  • accession: 714.288
  • assembly level: wgs
  • database: patric
  • NCBI tax ID: 714

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
gram-positiveno98.473no
anaerobicno92.979yes
halophileno52.8no
spore-formingno98.492no
glucose-utilyes52.963no
thermophileno95.667no
flagellatedno96.95no
aerobicno96.547yes
motileno88.482no
glucose-fermentno53.513no

External links

@ref: 45751

culture collection no.: CCUG 12604

straininfo link

  • @ref: 97967
  • straininfo: 302927

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
45751Curators of the CCUGhttps://www.ccug.se/strain?id=12604Culture Collection University of Gothenburg (CCUG) (CCUG 12604)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
97967Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID302927.1