Strain identifier
BacDive ID: 142454
Type strain:
Species: Aggregatibacter actinomycetemcomitans
NCBI tax ID(s): 714 (species)
version 8.1 (current version)
General
@ref: 45751
BacDive-ID: 142454
keywords: genome sequence, Bacteria, microaerophile, mesophilic
description: Aggregatibacter actinomycetemcomitans CCUG 12604 is a microaerophile, mesophilic bacterium that was isolated from Human blood,72-yr-old woman,clinical endocarditis.
NCBI tax id
- NCBI tax id: 714
- Matching level: species
doi: 10.13145/bacdive142454.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pasteurellales
- family: Pasteurellaceae
- genus: Aggregatibacter
- species: Aggregatibacter actinomycetemcomitans
- full scientific name: Aggregatibacter actinomycetemcomitans (Klinger 1912) Nørskov-Lauritsen and Kilian 2006
synonyms
@ref synonym 20215 Bacterium actinomycetemcomitans 20215 Haemophilus actinomycetemcomitans 20215 Actinobacillus actinomycetemcomitans
@ref: 45751
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pasteurellales
family: Pasteurellaceae
genus: Aggregatibacter
species: Aggregatibacter actinomycetemcomitans
type strain: no
Culture and growth conditions
culture temp
- @ref: 45751
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 45751
- oxygen tolerance: microaerophile
Isolation, sampling and environmental information
isolation
- @ref: 45751
- sample type: Human blood,72-yr-old woman,clinical endocarditis
- sampling date: 1982-08-24
- geographic location: Halmstad
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Human | #Female |
#Host Body Product | #Fluids | #Blood |
#Infection | #Inflammation | |
#Infection | #Patient |
Sequence information
Genome sequences
- @ref: 66792
- description: Aggregatibacter actinomycetemcomitans strain HK_1002
- accession: 714.288
- assembly level: wgs
- database: patric
- NCBI tax ID: 714
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
gram-positive | no | 98.473 | no |
anaerobic | no | 92.979 | yes |
halophile | no | 52.8 | no |
spore-forming | no | 98.492 | no |
glucose-util | yes | 52.963 | no |
thermophile | no | 95.667 | no |
flagellated | no | 96.95 | no |
aerobic | no | 96.547 | yes |
motile | no | 88.482 | no |
glucose-ferment | no | 53.513 | no |
External links
@ref: 45751
culture collection no.: CCUG 12604
straininfo link
- @ref: 97967
- straininfo: 302927
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
45751 | Curators of the CCUG | https://www.ccug.se/strain?id=12604 | Culture Collection University of Gothenburg (CCUG) (CCUG 12604) | |
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
97967 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID302927.1 |