Strain identifier

BacDive ID: 142281

Type strain: No

Species: Escherichia coli

NCBI tax ID(s): 562 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 45543

BacDive-ID: 142281

keywords: Bacteria, genome sequence

description: Escherichia coli CCUG 11425 is a bacterium that was isolated from Human gastroenteritis.

NCBI tax id

  • NCBI tax id: 562
  • Matching level: species

doi: 10.13145/bacdive142281.20220920.7

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Enterobacteriaceae
  • genus: Escherichia
  • species: Escherichia coli
  • full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)
  • synonyms

    • @ref: 20215
    • synonym: Bacillus coli

@ref: 45543

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacterales

family: Enterobacteriaceae

genus: Escherichia

species: Escherichia coli

type strain: no

Isolation, sampling and environmental information

isolation

  • @ref: 45543
  • sample type: Human gastroenteritis
  • sampling date: 1949

isolation source categories

Cat1Cat2
#Host#Human
#Host Body-Site#Gastrointestinal tract
#Infection#Inflammation
#Infection#Patient

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Escherichia coli NCTC8622GCA_900449145contigncbi562
66792Escherichia coli strain NCTC8622562.34230wgspatric562

External links

@ref: 45543

culture collection no.: CCUG 11425, NCTC 8622

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
45543Curators of the CCUGhttps://www.ccug.se/strain?id=11425Culture Collection University of Gothenburg (CCUG) (CCUG 11425)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes