Strain identifier

BacDive ID: 142100

Type strain: No

Species: Staphylococcus aureus

NCBI tax ID(s): 1280 (species)

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General

@ref: 45333

BacDive-ID: 142100

keywords: genome sequence, Bacteria, Gram-positive

description: Staphylococcus aureus CCUG 10777 is a Gram-positive bacterium of the family Staphylococcaceae.

NCBI tax id

  • NCBI tax id: 1280
  • Matching level: species

doi: 10.13145/bacdive142100.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Staphylococcaceae
  • genus: Staphylococcus
  • species: Staphylococcus aureus
  • full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Staphylococcus aureus subsp. anaerobius

@ref: 45333

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Staphylococcaceae

genus: Staphylococcus

species: Staphylococcus aureus

type strain: no

Morphology

cell morphology

  • @ref: 69480
  • gram stain: positive
  • confidence: 100

Physiology and metabolism

spore formation

@refspore formationconfidence
69481no100
69480no99.58

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate+reduction
683794853esculin-hydrolysis
6837916199urea+hydrolysis
683795291gelatin+hydrolysis
6837917634D-glucose+fermentation
6837916988D-ribose+fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol+fermentation
6837917306maltose+fermentation
6837917716lactose+fermentation
6837917992sucrose+fermentation
6837928087glycogen-fermentation
6837516199urea+hydrolysis
6837529016arginine+hydrolysis
6837518257ornithine-degradation
683754853esculin-hydrolysis
6837517634D-glucose+fermentation
6837515824D-fructose+fermentation
6837516024D-mannose+fermentation
6837517306maltose+fermentation
6837517716lactose+fermentation
6837527082trehalose+fermentation
6837516899D-mannitol+fermentation
6837516634raffinose-fermentation
6837516988D-ribose-fermentation
6837517057cellobiose-fermentation
6837517632nitrate+reduction
6837517992sucrose+fermentation
6837559640N-acetylglucosamine+fermentation
6837532528turanose-fermentation
6837522599arabinose-fermentation

antibiotic resistance

  • @ref: 68375
  • ChEBI: 28368
  • metabolite: novobiocin
  • is antibiotic: yes
  • is sensitive: yes
  • sensitivity conc.: 1.8 µg

metabolite production

  • @ref: 68375
  • Chebi-ID: 15688
  • metabolite: acetoin
  • production: yes

metabolite tests

  • @ref: 68375
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: +

enzymes

@refvalueactivityec
68375beta-glucuronidase-3.2.1.31
68375pyrrolidonyl arylamidase+3.4.19.3
68375alkaline phosphatase+3.1.3.1
68375L-arginine arylamidase-
68375beta-galactosidase-3.2.1.23
68375beta-glucosidase-3.2.1.21
68375ornithine decarboxylase-4.1.1.17
68375arginine dihydrolase+3.5.3.6
68375urease+3.5.1.5
68379catalase+1.11.1.6
68379gelatinase+
68379urease+3.5.1.5
68379beta-glucosidase-3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase+3.4.19.3
68379pyrazinamidase-3.5.1.B15

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
45333+-++--+--++-++-++++-+

API ID32STA

@refUREADH ArgODCESCGLUFRUMNEMALLACTREMANRAFRIBCELNITVPbeta GALArgAPALPyrANOVOSACNAGTURARAbeta GUR
45333++--+++++++---++--++-++---

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Staphylococcus aureus NCTC4163GCA_900635505completencbi1280
66792Staphylococcus aureus strain NCTC41631280.19118completepatric1280

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
flagellatedno91.254no
gram-positiveyes87.787no
anaerobicno99.463no
aerobicyes88.454no
halophileyes94.102no
spore-formingno93.587no
thermophileno99.675no
glucose-utilyes87.549no
motileno89.407no
glucose-fermentyes87.131yes

External links

@ref: 45333

culture collection no.: CCUG 10777, NCTC 4163

literature

topicPubmed-IDtitleauthorsjournalyearmeshDOItopic2
Pathogenicity11486603Synthesis and antimicrobial activity of novel pyrazole, pyrazoline, pyrazolinone and pyrazolidinedione derivatives of benzimidazole.Soliman R, Habib NS, Ashour FA, el-Taiebi MBoll Chim Farm2001Anti-Bacterial Agents, Anti-Infective Agents/*chemical synthesis/*pharmacology, Bacteria/drug effects, Benzimidazoles/*chemical synthesis/*pharmacology, Fungi/drug effects, Indicators and Reagents, Microbial Sensitivity Tests, Pyrazoles/*chemical synthesis/*pharmacology
Enzymology14552763Low molecular mass peptide dendrimers that express antimicrobial properties.Janiszewska J, Swieton J, Lipkowski AW, Urbanczyk-Lipkowska ZBioorg Med Chem Lett2003Anti-Bacterial Agents/*chemical synthesis/isolation & purification/*pharmacology, Chromatography, High Pressure Liquid, Escherichia coli/drug effects, Indicators and Reagents, Microbial Sensitivity Tests, Peptides/*chemical synthesis/isolation & purification/*pharmacology, Spectrometry, Mass, Electrospray Ionization, Staphylococcus aureus/drug effects, Structure-Activity Relationship10.1016/j.bmcl.2003.08.009Phylogeny
Genetics15500986Investigation of morphological changes to Staphylococcus aureus induced by ovine-derived antimicrobial peptides using TEM and AFM.Anderson RC, Haverkamp RG, Yu PLFEMS Microbiol Lett2004Amino Acid Sequence, Blood Proteins/chemistry/*pharmacology, Cathelicidins, Microscopy, Atomic Force, Microscopy, Electron, Transmission, Molecular Sequence Data, Staphylococcus aureus/*drug effects/*ultrastructure10.1016/j.femsle.2004.09.027Pathogenicity
Pathogenicity17101263Alcohol ethoxylates mediate their bacteriostatic effect by altering the cell membrane of Escherichia coli NCTC 8196.Moore SL, Denyer SP, Hanlon GW, Olliff CJ, Lansley AB, Rabone K, Jones MInt J Antimicrob Agents2006Alcohols/*pharmacology, Anti-Bacterial Agents/*pharmacology, Cell Membrane/*drug effects, Cell Membrane Permeability/drug effects, Escherichia coli/*drug effects, Microbial Sensitivity Tests, Staphylococcus aureus/drug effects, Surface-Active Agents/*pharmacology10.1016/j.ijantimicag.2006.08.023
Pathogenicity29177803Cytotoxic and antimicrobial effects of biosynthesized ZnO nanoparticles using of Chelidonium majus extract.Dobrucka R, Dlugaszewska J, Kaczmarek MBiomed Microdevices2017Anti-Infective Agents/*chemical synthesis/chemistry/*pharmacology, Antineoplastic Agents/chemical synthesis/pharmacology, Cell Cycle/drug effects, Cell Line, Tumor, Cell Proliferation/drug effects, Chelidonium/*chemistry, Humans, Metal Nanoparticles/*chemistry, Microbial Sensitivity Tests, Microscopy, Atomic Force, Microscopy, Electron, Transmission, Plant Extracts/chemistry, Spectrophotometry, Ultraviolet, Spectroscopy, Fourier Transform Infrared, X-Ray Diffraction, Zinc Oxide/chemical synthesis/*pharmacology10.1007/s10544-017-0233-9Genetics

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
45333Curators of the CCUGhttps://www.ccug.se/strain?id=10777Culture Collection University of Gothenburg (CCUG) (CCUG 10777)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
68375Automatically annotated from API ID32STA
68379Automatically annotated from API Coryne
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1