Strain identifier

BacDive ID: 141973

Type strain: No

Species: Brevibacillus choshinensis

NCBI tax ID(s): 54911 (species)

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General

@ref: 45169

BacDive-ID: 141973

keywords: Bacteria, microaerophile

description: Brevibacillus choshinensis CCUG 9174 B is a microaerophile bacterium that was isolated from Human blood,fatal Herpes simplex encephalitis.

NCBI tax id

  • NCBI tax id: 54911
  • Matching level: species

doi: 10.13145/bacdive141973.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Paenibacillaceae
  • genus: Brevibacillus
  • species: Brevibacillus choshinensis
  • full scientific name: Brevibacillus choshinensis (Takagi et al. 1993) Shida et al. 1996

  • synonyms

    • @ref: 20215
    • synonym: Bacillus choshinensis

@ref: 45169

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Paenibacillaceae

genus: Brevibacillus

species: Brevibacillus choshinensis

type strain: no

Physiology and metabolism

oxygen tolerance

  • @ref: 45169
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837316199urea-hydrolysis
6837317632nitrate-reduction
68373606565hippurate+hydrolysis
6837378019triphenyltetrazolium chloride-reduction
6837317634D-glucose+assimilation
6837330031succinate+assimilation
6837330089acetate+assimilation
6837317272propionate+assimilation
6837325115malate+assimilation
6837316947citrate+assimilation

antibiotic resistance

@refChEBImetaboliteis antibioticis sensitivesensitivity conc.
6837348923erythromycinyesyes14 µg
68373474053cefazolinyesyes224 µg
68373100147nalidixic acidyesyes84 µg

metabolite production

  • @ref: 68373
  • Chebi-ID: 16136
  • metabolite: hydrogen sulfide
  • production: no

enzymes

@refvalueactivityec
68373catalase+1.11.1.6
68373alkaline phosphatase+3.1.3.1
68373L-aspartate arylamidase+3.4.11.21
68373L-arginine arylamidase-
68373pyrrolidonyl arylamidase-3.4.19.3
68373gamma-glutamyltransferase-2.3.2.2
68373esterase+
68373urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase-3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
45169-+++----------------

API CAM

@refURENITESTHIPGGTTTCPYRAArgAAspAPALH2SGLUSUTNALCFZACEPROPMLTCITEROCAT
45169--++----++-++--++++-+

Isolation, sampling and environmental information

isolation

  • @ref: 45169
  • sample type: Human blood,fatal Herpes simplex encephalitis
  • sampling date: 1979-11-01
  • geographic location: Umeå
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Blood
#Infection#Inflammation
#Infection#Patient

External links

@ref: 45169

culture collection no.: CCUG 9174 B, LMG 8609, LMG 8610

straininfo link

  • @ref: 97559
  • straininfo: 6845

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
45169Curators of the CCUGhttps://www.ccug.se/strain?id=9174Culture Collection University of Gothenburg (CCUG) (CCUG 9174 B)
68373Automatically annotated from API CAM
68382Automatically annotated from API zym
97559Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID6845.1