Strain identifier
version 8.1 (current version)
General
@ref: 45158
BacDive-ID: 141965
keywords: Bacteria
description: Clostridioides difficile CCUG 9004 is a bacterium that was isolated from Human feces,81-yr-old woman,diarrhea.
NCBI tax id
- NCBI tax id: 1496
- Matching level: species
doi: 10.13145/bacdive141965.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Peptostreptococcaceae
- genus: Clostridioides
- species: Clostridioides difficile
- full scientific name: Clostridioides difficile (Hall and O'Toole 1935) Lawson et al. 2016
synonyms
@ref synonym 20215 Bacillus difficilis 20215 Peptoclostridium difficile 20215 Clostridium difficile
@ref: 45158
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Eubacteriales
family: Peptostreptococcaceae
genus: Clostridioides
species: Clostridioides difficile
type strain: no
Physiology and metabolism
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 45158 C10:0 1.5 10 45158 C12:0 3.9 12 45158 C14:0 3.4 14 45158 C16:0 14.7 16 45158 C18:0 5.8 18 45158 C10:0 ISO 1.1 9.605 45158 C12:0 ISO 1.6 11.608 45158 C13:0 ISO 2OH 1.2 13.814 45158 C16:0 aldehyde 5.2 14.949 45158 C16:0 iso 2.3 15.626 45158 C16:1 ω7c 8.6 15.819 45158 C16:1 ω9c 5.8 15.774 45158 C17:0 CYCLO 3.3 16.888 45158 C17:1 ISO I/C16:0 DMA 18.4 16.481 45158 C18:1 ISO H 1.9 17.46 45158 C18:1 ω7c /12t/9t 2.1 17.824 45158 C18:1 ω9c 5.4 17.769 45158 C18:2 ω6,9c/C18:0 ANTE 1.6 17.724 45158 C19:0 CYCLO ω9c 3.6 18.87 45158 C19:1 ISO I 5 18.473 45158 Unidentified 1.6 16.108 45158 unknown 9.730 2 9.73 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
Isolation, sampling and environmental information
isolation
- @ref: 45158
- sample type: Human feces,81-yr-old woman,diarrhea
- sampling date: 1979
- geographic location: Göteborg
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | #Female |
| #Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
| #Infection | #Disease | |
| #Infection | #Patient |
External links
@ref: 45158
culture collection no.: CCUG 9004
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 45158 | Curators of the CCUG | https://www.ccug.se/strain?id=9004 | Culture Collection University of Gothenburg (CCUG) (CCUG 9004) |