Strain identifier

BacDive ID: 141787

Type strain: No

Species: Streptococcus pneumoniae

NCBI tax ID(s): 1313 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 44929

BacDive-ID: 141787

keywords: genome sequence, Bacteria

description: Streptococcus pneumoniae CCUG 6798 is a bacterium that was isolated from Human blood,70-yr-old woman,pneumonia.

NCBI tax id

  • NCBI tax id: 1313
  • Matching level: species

doi: 10.13145/bacdive141787.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Streptococcaceae
  • genus: Streptococcus
  • species: Streptococcus pneumoniae
  • full scientific name: Streptococcus pneumoniae (Klein 1884) Chester 1901 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Staphylococcus pneumoniae
    20215Micrococcus pneumoniae

@ref: 44929

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Streptococcaceae

genus: Streptococcus

species: Streptococcus pneumoniae

type strain: no

Isolation, sampling and environmental information

isolation

  • @ref: 44929
  • sample type: Human blood,70-yr-old woman,pneumonia
  • sampling date: 1977-12-26
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Female
#Host Body Product#Fluids#Blood
#Infection#Inflammation
#Infection#Patient

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Streptococcus pneumoniae CCUG 6798GCA_001678985scaffoldncbi1313
66792Streptococcus pneumoniae strain CCUG 67981313.13074wgspatric1313

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
flagellatedno96.67no
gram-positiveyes93.07no
anaerobicno94.789no
aerobicno96.167no
halophileyes80.421no
spore-formingno93.272no
glucose-utilyes87.757no
thermophileno98.783no
motileno94.919no
glucose-fermentyes86.038no

External links

@ref: 44929

culture collection no.: CCUG 6798

straininfo link

  • @ref: 97412
  • straininfo: 57823

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
44929Curators of the CCUGhttps://www.ccug.se/strain?id=6798Culture Collection University of Gothenburg (CCUG) (CCUG 6798)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
97412Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID57823.1