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Strain identifier

BacDive ID: 141744

Type strain: Yes

Species: Leptospira biflexa

NCBI tax ID(s): 172 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 44874

BacDive-ID: 141744

keywords: genome sequence, Bacteria

description: Leptospira biflexa CCUG 5912 is a bacterium that was isolated from Stream water.

NCBI tax id

  • NCBI tax id: 172
  • Matching level: species

doi: 10.13145/bacdive141744.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/spirochaetota
  • domain: Bacteria
  • phylum: Spirochaetota
  • class: Spirochaetia
  • order: Leptospirales
  • family: Leptospiraceae
  • genus: Leptospira
  • species: Leptospira biflexa
  • full scientific name: Leptospira biflexa (Wolbach and Binger 1914) Noguchi 1918 (Approved Lists 1980)
  • synonyms

    • @ref: 20215
    • synonym: Spirochaeta biflexa

@ref: 44874

domain: Bacteria

phylum: Spirochaetes

class: Spirochaetes

order: Leptospirales

family: Leptospiraceae

genus: Leptospira

species: Leptospira biflexa

type strain: yes

Morphology

cell morphology

  • @ref: 69480
  • gram stain: negative
  • confidence: 98.469

Physiology and metabolism

spore formation

  • @ref: 69480
  • spore formation: no
  • confidence: 98.001

halophily

  • @ref: 69480
  • halophily level: non-halophilic
  • confidence: 95.972

Isolation, sampling and environmental information

isolation

  • @ref: 44874
  • sample type: Stream water
  • country: Italy
  • origin.country: ITA
  • continent: Europe

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic
  • Cat3: #River (Creek)

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'456481.4completepatric456481
66792Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' strain Patoc 1 (Paris) strain Patoc 1 (Paris) strain Patoc 1 (Paris)456481.32plasmidpatric456481
66792Enterococcus faecium 11B10_MSG5005GCA_002140255scaffoldpatric1352
66792Klebsiella pneumoniae FDAARGOS_1312GCA_016903495completepatric573

External links

@ref: 44874

culture collection no.: CCUG 5912, ATCC 23582

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
44874Curators of the CCUGhttps://www.ccug.se/strain?id=5912Culture Collection University of Gothenburg (CCUG) (CCUG 5912)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes