Strain identifier
version 9.3 (current version)
General
@ref: 44533
BacDive-ID: 141499
keywords: genome sequence, Bacteria
description: Staphylococcus aureus CCUG 2394 is a bacterium of the family Staphylococcaceae.
NCBI tax id
- NCBI tax id: 1280
- Matching level: species
doi: 10.13145/bacdive141499.20250331.9.3
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Staphylococcaceae
- genus: Staphylococcus
- species: Staphylococcus aureus
- full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Staphylococcus aureus subsp. anaerobius
@ref: 44533
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Caryophanales
family: Staphylococcaceae
genus: Staphylococcus
species: Staphylococcus aureus
type strain: no
Morphology
cell morphology
- @ref: 125439
- gram stain: positive
- confidence: 95.1
Physiology and metabolism
oxygen tolerance
- @ref: 125439
- oxygen tolerance: facultative anaerobe
- confidence: 94.3
spore formation
- @ref: 125439
- spore formation: no
- confidence: 93.2
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Staphylococcus aureus NCTC10344 | GCA_900474755 | complete | ncbi | 1280 |
| 66792 | Staphylococcus aureus strain NCTC10344 | 1280.16917 | complete | patric | 1280 |
Genome-based predictions
predictions
| @ref | model | trait | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 125439 | BacteriaNet | oxygen_tolerance | Oxygenic conditions needed for growth | facultative anaerobe | 94.3 | |
| 125439 | BacteriaNet | gram_stain | Reaction to gram-staining | positive | 95.1 | |
| 125439 | BacteriaNet | motility | Ability to perform movement | no | 82.1 | |
| 125439 | BacteriaNet | spore_formation | Ability to form endo- or exospores | no | 93.2 | |
| 125438 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 84.299 | no |
| 125438 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 99.311 | no |
| 125438 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 52.353 | no |
| 125438 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 72.816 | no |
| 125438 | thermophile | thermophilic | Ability to grow at temperatures above or equal to 45°C | no | 93.358 | no |
| 125438 | motile2+ | flagellated | Ability to perform flagellated movement | no | 79.888 | no |
External links
@ref: 44533
culture collection no.: CCUG 2394, NCTC 10344
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 44533 | Curators of the CCUG | https://www.ccug.se/strain?id=2394 | Culture Collection University of Gothenburg (CCUG) (CCUG 2394) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann | Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets | 10.1101/2024.08.12.607695 | |
| 125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy | deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 | https://github.com/GenomeNet/deepG |