Strain identifier
version 8.1 (current version)
General
@ref: 44529
BacDive-ID: 141495
keywords: genome sequence, Bacteria, Gram-positive
description: Staphylococcus aureus CCUG 2356 is a Gram-positive bacterium that was isolated from Air.
NCBI tax id
- NCBI tax id: 1280
- Matching level: species
doi: 10.13145/bacdive141495.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Staphylococcaceae
- genus: Staphylococcus
- species: Staphylococcus aureus
- full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Staphylococcus aureus subsp. anaerobius
@ref: 44529
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Caryophanales
family: Staphylococcaceae
genus: Staphylococcus
species: Staphylococcus aureus
type strain: no
Morphology
cell morphology
- @ref: 69480
- gram stain: positive
- confidence: 100
Physiology and metabolism
spore formation
@ref | spore formation | confidence |
---|---|---|
69481 | no | 100 |
69480 | no | 99.599 |
Isolation, sampling and environmental information
isolation
- @ref: 44529
- sample type: Air
isolation source categories
- Cat1: #Environmental
- Cat2: #Air
Sequence information
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Staphylococcus aureus NCTC10443 | GCA_900458405 | contig | ncbi | 1280 |
66792 | Staphylococcus aureus strain NCTC10443 | 1280.18121 | wgs | patric | 1280 |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
spore-forming | no | 100 | no |
motile | no | 89.712 | no |
gram-positive | yes | 88.661 | no |
anaerobic | no | 99.519 | no |
aerobic | yes | 89.636 | no |
halophile | yes | 93.917 | no |
spore-forming | no | 92.864 | no |
glucose-util | yes | 87.383 | no |
flagellated | no | 91.355 | no |
thermophile | no | 99.76 | no |
glucose-ferment | yes | 86.523 | no |
External links
@ref: 44529
culture collection no.: CCUG 2356, NCTC 10443
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Enzymology | 9371333 | Cloning and characterization of the fmt gene which affects the methicillin resistance level and autolysis in the presence of triton X-100 in methicillin-resistant Staphylococcus aureus. | Komatsuzawa H, Sugai M, Ohta K, Fujiwara T, Nakashima S, Suzuki J, Lee CY, Suginaka H | Antimicrob Agents Chemother | 10.1128/AAC.41.11.2355 | 1997 | Bacteriolysis/genetics, Cloning, Molecular, Excipients/pharmacology, Hydroxymethyl and Formyl Transferases/*genetics/pharmacology, Methicillin Resistance/*genetics, Microbial Sensitivity Tests, Molecular Sequence Data, Octoxynol/pharmacology, Oxacillin/*pharmacology, Penicillins/*pharmacology, Staphylococcus aureus/*drug effects/genetics | Genetics |
Metabolism | 10896508 | Tn551-mediated insertional inactivation of the fmtB gene encoding a cell wall-associated protein abolishes methicillin resistance in Staphylococcus aureus. | Komatsuzawa H, Ohta K, Sugai M, Fujiwara T, Glanzmann P, Berger-BachiB, Suginaka H | J Antimicrob Chemother | 10.1093/jac/45.4.421 | 2000 | Bacterial Proteins/*genetics/*metabolism, Base Sequence, Blotting, Western, Cell Wall/*metabolism, Cloning, Molecular, DNA Primers, DNA Transposable Elements/*genetics, DNA, Bacterial/genetics, Genes, Bacterial/*genetics, Genetic Complementation Test, Indicators and Reagents, Methicillin Resistance/*genetics, Microbial Sensitivity Tests, Molecular Sequence Data, Mutagenesis/genetics, Oxacillin/pharmacology, Retroelements/*genetics, Staphylococcus aureus/drug effects/*genetics/metabolism, Transduction, Genetic | Enzymology |
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
44529 | Curators of the CCUG | https://www.ccug.se/strain?id=2356 | Culture Collection University of Gothenburg (CCUG) (CCUG 2356) | |
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 |