Strain identifier

BacDive ID: 141303

Type strain: No

Species: Shewanella algae

NCBI tax ID(s): 38313 (species)

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General

@ref: 44265

BacDive-ID: 141303

keywords: Bacteria

description: Shewanella algae CCUG 789 is a bacterium of the family Shewanellaceae.

NCBI tax id

  • NCBI tax id: 38313
  • Matching level: species

doi: 10.13145/bacdive141303.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Alteromonadales
  • family: Shewanellaceae
  • genus: Shewanella
  • species: Shewanella algae
  • full scientific name: Shewanella algae corrig. Simidu et al. 1990

  • synonyms

    @refsynonym
    20215Shewanella haliotis
    20215Shewanella alga
    20215Shewanella upenei

@ref: 44265

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Alteromonadales

family: Shewanellaceae

genus: Shewanella

species: Shewanella algae

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837418257ornithine+degradation
6837429016arginine-hydrolysis
6837425094lysine-degradation
6837416199urea+hydrolysis
6837418403L-arabitol-builds acid from
6837418024D-galacturonic acid-builds acid from
68374Potassium 5-ketogluconate-builds acid from
6837416899D-mannitol-builds acid from
6837417306maltose-builds acid from
6837415963ribitol-builds acid from
6837418394palatinose-builds acid from
6837415792malonate+assimilation
6837427897tryptophan-energy source
6837417634D-glucose-builds acid from
6837417992sucrose-builds acid from
6837430849L-arabinose-builds acid from
6837418333D-arabitol-builds acid from
6837427082trehalose-builds acid from
6837462345L-rhamnose-builds acid from
6837417268myo-inositol-builds acid from
6837417057cellobiose-builds acid from
6837430911sorbitol-builds acid from

metabolite production

  • @ref: 68374
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68374
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68374L-aspartate arylamidase+3.4.11.21
68374alpha-maltosidase-
68374alpha-galactosidase-3.2.1.22
68374alpha-glucosidase-3.2.1.20
68374beta-galactosidase-3.2.1.23
68374N-acetyl-beta-glucosaminidase-3.2.1.52
68374beta-glucuronidase-3.2.1.31
68374beta-glucosidase-3.2.1.21
68374lipase-
68374urease+3.5.1.5
68374lysine decarboxylase-4.1.1.18
68374arginine dihydrolase-3.5.3.6
68374ornithine decarboxylase+4.1.1.17

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    44265C12:01.312
    44265C13:0213
    44265C14:00.714
    44265C15:09.715
    44265C16:03.816
    44265C17:01.817
    44265C11:0 3OH0.912.441
    44265C12:0 3OH1.213.455
    44265C13:0 3OH/C15:1 i I/H2.414.469
    44265C13:0 iso6.412.612
    44265C13:0 ISO 3OH314.11
    44265C14:0 3OH/C16:1 ISO I0.615.485
    44265C14:0 ISO1.413.618
    44265C15:0 ISO26.614.621
    44265C15:0 ISO 3OH0.716.135
    44265C15:1 ω6c1.214.856
    44265C15:1 ω8c1.514.792
    44265C16:1 ω7c8.115.819
    44265C16:1 ω9c115.774
    44265C17:0 iso0.816.629
    44265C17:1 ω6c1.116.862
    44265C17:1 ω8c21.216.792
    44265C18:1 ω7c /12t/9t117.824
    44265C18:1 ω9c1.117.769
    44265C18:2 ω6,9c/C18:0 ANTE0.517.724
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API ID32E

@refODCADH ArgLDC LysURELARLGAT5KGLIPRPbeta GLUMANMALADOPLEbeta GURMNTINDbeta NAGbeta GALGLUSACLARADARLalpha GLUalpha GALTRERHAINOCELSORalphaMALAspA
44265+--+----+------+---------------+

External links

@ref: 44265

culture collection no.: CCUG 789

straininfo link

  • @ref: 96991
  • straininfo: 56974

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
44265Curators of the CCUGhttps://www.ccug.se/strain?id=789Culture Collection University of Gothenburg (CCUG) (CCUG 789)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
68374Automatically annotated from API ID32E
96991Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID56974.1