Strain identifier

BacDive ID: 141135

Type strain: Yes

Species: Haloarchaeobius baliensis

Strain Designation: 2b_61_3

NCBI tax ID(s): 1670458 (species)

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General

@ref: 44051

BacDive-ID: 141135

keywords: 16S sequence, Archaea, aerobe, chemoheterotroph, Gram-negative, motile, rod-shaped, pigmented

description: Haloarchaeobius baliensis 2b_61_3 is an aerobe, chemoheterotroph, Gram-negative archaeon that has a orange-red pigmentation and was isolated from solar saltern sample of brine and sediment.

NCBI tax id

  • NCBI tax id: 1670458
  • Matching level: species

doi: 10.13145/bacdive141135.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/archaea
  • keyword: phylum/methanobacteriota
  • domain: Archaea
  • phylum: Methanobacteriota
  • class: Halobacteria
  • order: Halobacteriales
  • family: Halobacteriaceae
  • genus: Haloarchaeobius
  • species: Haloarchaeobius baliensis
  • full scientific name: Haloarchaeobius baliensis Mori et al. 2016

@ref: 44051

domain: Archaea

phylum: Euryarchaeota

class: Halobacteria

order: Halobacteriales

family: Halobacteriaceae

genus: Haloarchaeobius

species: Haloarchaeobius baliensis

strain designation: 2b_61_3

type strain: yes

Morphology

cell morphology

  • @ref: 44051
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

colony morphology

  • @ref: 44051
  • colony color: red
  • medium used: isolation medium

pigmentation

  • @ref: 44051
  • production: yes
  • color: orange-red

Culture and growth conditions

culture medium

  • @ref: 44051
  • name: isolation medium
  • growth: yes

culture temp

@refgrowthtypetemperature
44051positivegrowth20-48
44051positiveoptimum42-44

culture pH

@refabilitytypepHPH range
44051positivegrowth5.5-9.0alkaliphile
44051positiveoptimum6.5-7.0

Physiology and metabolism

oxygen tolerance

  • @ref: 44051
  • oxygen tolerance: aerobe

nutrition type

  • @ref: 44051
  • type: chemoheterotroph

halophily

@refsaltgrowthtested relationconcentrationhalophily level
44051NaClpositivegrowth1.7-5.1 M
44051NaClpositiveoptimum2.6 M
44051MgCl2positiveoptimum0.25 Mextremely halophilic

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
4405130089acetate-growth
4405116947citrate-growth
4405117108D-arabinose-growth
4405115824D-fructose-growth
4405112936D-galactose-growth
4405116899D-mannitol-growth
4405116024D-mannose-growth
4405116988D-ribose-growth
4405117924D-sorbitol-growth
4405117317D-sorbose-growth
4405165327D-xylose-growth
4405129806fumarate-growth
4405115428glycine-growth
4405116467L-arginine-growth
4405117196L-asparagine-growth
4405129991L-aspartate-growth
4405117561L-cysteine-growth
4405129985L-glutamate-growth
4405118019L-lysine-growth
4405116643L-methionine-growth
4405162345L-rhamnose-growth
4405117115L-serine-growth
4405116414L-valine-growth
4405124996lactate-growth
4405117716lactose-growth
4405125115malate-growth
4405128053melibiose-growth
4405118257ornithine-growth
4405115361pyruvate-growth
4405116634raffinose-growth
4405115963ribitol-growth
4405130031succinate-growth
44051casein-hydrolysis
440515291gelatin-hydrolysis
4405117057cellobiose+builds acid from
4405117634D-glucose+builds acid from
4405117754glycerol+builds acid from
4405117306maltose+builds acid from
4405128017starch+builds acid from
4405117992sucrose+builds acid from
4405127082trehalose+builds acid from
4405117057cellobiose+carbon source
4405117634D-glucose+carbon source
4405117754glycerol+carbon source
4405116977L-alanine+carbon source
4405117295L-phenylalanine+carbon source
4405117203L-proline+carbon source
4405117895L-tyrosine+carbon source
4405117306maltose+carbon source
4405128017starch+carbon source
4405117992sucrose+carbon source
4405127082trehalose+carbon source
4405117057cellobiose+energy source
4405117634D-glucose+energy source
4405117754glycerol+energy source
4405116977L-alanine+energy source
4405117295L-phenylalanine+energy source
4405117203L-proline+energy source
4405117895L-tyrosine+energy source
4405117306maltose+energy source
4405128017starch+energy source
4405117992sucrose+energy source
4405127082trehalose+energy source
4405128017starch+hydrolysis

antibiotic resistance

@refChEBImetaboliteis antibioticis sensitivesensitivity conc.is resistantresistance conc.
44051338412(-)-anisomycinyesyes35 µg/mL
4405117698chloramphenicolyesyes30 µg/mL
4405148923erythromycinyesyes25 µg/mL
4405171415nitrofurantoinyesyes50 µg/mL
4405128368novobiocinyesyes25 µg/mL
4405128077rifampicinyesyes25 µg/mL
4405128971ampicillinyesyes25 µg/mL
4405117833gentamicinyesyes25 µg/mL
440516104kanamycinyesyes25 µg/mL
44051100147nalidixic acidyesyes30 µg/mL
440517507neomycinyesyes30 µg/mL
4405118208penicillin gyesyes10 Unit
440518309polymyxin byesyes100 Unit
4405117076streptomycinyesyes25 µg/mL

enzymes

@refvalueactivityec
44051catalase+1.11.1.6
44051cytochrome oxidase+1.9.3.1
44051alkaline phosphatase+3.1.3.1
44051esterase (C 4)+
44051esterase Lipase (C 8)+
44051alpha-chymotrypsin+3.4.21.1
44051acid phosphatase+3.1.3.2
44051naphthol-AS-BI-phosphohydrolase+
44051beta-galactosidase-3.2.1.23
44051alpha-glucosidase-3.2.1.20
44051beta-glucosidase-3.2.1.21
44051lipase (C 14)-
44051leucine arylamidase-3.4.11.1
44051valine arylamidase-
44051cystine arylamidase-3.4.11.3
44051trypsin-3.4.21.4
44051alpha-galactosidase-3.2.1.22
44051beta-glucuronidase-3.2.1.31
44051N-acetyl-beta-glucosaminidase-3.2.1.52
44051alpha-mannosidase-3.2.1.24
44051alpha-fucosidase-3.2.1.51

Isolation, sampling and environmental information

isolation

  • @ref: 44051
  • sample type: solar saltern sample of brine and sediment
  • sampling date: 2013-09
  • geographic location: Pasinggahan, Bali
  • country: Indonesia
  • origin.country: IDN
  • continent: Asia
  • latitude: -8.55194
  • longitude: 115.479
  • enrichment culture: supplemented basal medium
  • enrichment culture composition: (per litre): 0.1 g Bacto Yeast Extract (Difco), 0.1 g Bacto Casamino Acids (Difco), 2 g KCl, 0.3 g K2HPO4, 0.15 g CaCl2 . 2H2O, 1 g NH4Cl, 50 g MgSO4 . 7H2O, 200 g NaCl and 2 ml trace element solution (Mori et al., 2008a) supplemented with 1.7 g cellobiose, 1 g sodium glutamate and 1 g trisodium citrate per litre; pH with NaOH adjusted to 7.2
  • enrichment culture duration: 14 days
  • enrichment culture temperature: 30

isolation source categories

Cat1Cat2Cat3
#Condition#Saline
#Environmental#Aquatic#Sediment
#Environmental#Terrestrial#Coast

Sequence information

16S sequences

@refdescriptionaccessiondatabase
44051Haloarchaeobius baliensis gene for 16S ribosomal RNA, partial sequenceLC061269nuccore
44051Haloarchaeobius baliensis gene for 16S ribosomal RNA, partial sequenceLC061270nuccore

GC content

  • @ref: 44051
  • GC-content: 67.2
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 44051

culture collection no.: NBRC 110517, InaCC Ar2

literature

  • topic: Phylogeny
  • Pubmed-ID: 26449644
  • title: Haloarchaeobius baliensis sp. nov., isolated from a solar saltern.
  • authors: Mori K, Nurcahyanto DA, Kawasaki H, Lisdiyanti P, Yopi, Suzuki KI
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijsem.0.000672
  • year: 2015
  • mesh: Base Composition, DNA, Archaeal/genetics, DNA-Directed RNA Polymerases/genetics, Fatty Acids/chemistry, Genes, Archaeal, Halobacteriaceae/*classification/genetics/isolation & purification, Indonesia, Molecular Sequence Data, Nucleic Acid Hybridization, *Phylogeny, Pigmentation, RNA, Ribosomal, 16S/genetics, *Saline Waters, Sequence Analysis, DNA, *Water Microbiology
  • topic2: Genetics

Reference

@idauthorstitledoi/urljournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
44051Koji Mori, Dian Alan Nurcahyanto, Hiroko Kawasaki, Puspita Lisdiyanti, Yopi and Ken-ichiro SuzukiHaloarchaeobius baliensis sp. nov., isolated from a solar saltern10.1099/ijsem.0.000672IJSEM 66: 38-43 201626449644