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Strain identifier

BacDive ID: 141108

Type strain: Yes

Species: Streptomyces kalpinensis

NCBI tax ID(s): 1236311 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 44016

BacDive-ID: 141108

keywords: 16S sequence, Bacteria, aerobe, spore-forming, Gram-positive

description: Streptomyces kalpinensis CCTCC AA 2015028 is an aerobe, spore-forming, Gram-positive bacterium that builds an aerial mycelium and was isolated from a salt water beach.

NCBI tax id

  • NCBI tax id: 1236311
  • Matching level: species

doi: 10.13145/bacdive141108.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Streptomycetales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces kalpinensis
  • full scientific name: Streptomyces kalpinensis Ma et al. 2017

@ref: 44016

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Streptomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces kalpinensis

type strain: yes

Morphology

cell morphology

  • @ref: 44016
  • gram stain: positive

multicellular morphology

@refforms multicellular complexcomplex namecomplex colormedium name
44016yesaerial myceliumwhiteGauzes No. 1 medium
44016yessubstrate myceliumcolourlessGauzes No. 1 medium

Culture and growth conditions

culture temp

@refgrowthtypetemperaturerange
44016positivegrowth20-37
44016positiveoptimum28mesophilic

culture pH

@refabilitytypepHPH range
44016positivegrowth6.0-12.0alkaliphile
44016positiveoptimum7

Physiology and metabolism

oxygen tolerance

  • @ref: 44016
  • oxygen tolerance: aerobe

spore formation

  • @ref: 44016
  • spore description: spiral spores are formed at the end of the aerial mycelium, spore surface is smooth, forms spore chains on the aerial mycelium
  • type of spore: spore
  • spore formation: yes

halophily

@refsaltgrowthtested relationconcentration
44016NaClpositivegrowth0-3 %
44016NaClpositiveoptimum1 %

observation

@refobservation
44016predominant mena-quinones are MK-9(H8), MK-9(H2) and MK-9(H6)
44016shows poor growth on ISP (International Streptomyces Project) medium 5, ISP medium 6 and Czapek's medium, moderate growth on ISP medium 3 and nutrient agar, relatively good growth on modified Gauzes No. 1 medium, ISP medium 1 and ISP medium 7, but no

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
440165291gelatin-assimilation
44016milk-assimilation
4401615824D-fructose-carbon source
4401665327D-xylose-carbon source
4401617268myo-inositol-carbon source
4401630849L-arabinose-carbon source
4401617716lactose-carbon source
440166731melezitose-carbon source
4401617814salicin-carbon source
4401617992sucrose-carbon source
4401617151xylitol-carbon source
4401628017starch-hydrolysis
4401629991L-aspartate-nitrogen source
4401617561L-cysteine-nitrogen source
4401617057cellobiose+carbon source
4401616261chitosan+carbon source
4401628260galactose+carbon source
4401617234glucose+carbon source
4401618287L-fucose+carbon source
4401662345L-rhamnose+carbon source
4401617306maltose+carbon source
4401633942ribose+carbon source
4401628017starch+carbon source
4401662968cellulose+hydrolysis
4401653424tween 20+hydrolysis
4401653423tween 40+hydrolysis
4401653425tween 60+hydrolysis
4401653426tween 80+hydrolysis
44016L-alanine 4-nitroanilide+nitrogen source
4401616467L-arginine+nitrogen source
4401617196L-asparagine+nitrogen source
4401616283L-cystine+nitrogen source
4401615603L-leucine+nitrogen source
4401618019L-lysine+nitrogen source
4401616643L-methionine+nitrogen source
4401615729L-ornithine+nitrogen source
4401616857L-threonine+nitrogen source
4401616828L-tryptophan+nitrogen source
4401617895L-tyrosine+nitrogen source
4401616414L-valine+nitrogen source
4401617632nitrate+reduction

metabolite production

@refChebi-IDmetaboliteproduction
4401689634melaninno
4401615138sulfideno

enzymes

@refvalueactivityec
44016catalase+1.11.1.6
44016urease+3.5.1.5
44016cytochrome oxidase+1.9.3.1

fatty acid profile

  • fatty acids

    @reffatty acidpercentage
    44016C15:0 anteiso9
    44016C17:0 anteiso2.7
    44016C16:022
    44016C17:01.2
    44016C17:1ω8c1
    44016C18:1ω9c1.4
    44016C14:0 iso5
    44016C15:0 iso6
    44016C16:0 iso22
    44016C16:1 iso H1.9
  • type of FA analysis: whole cell analysis
  • software version: Sherlock 6.0
  • system: MIS MIDI

Isolation, sampling and environmental information

isolation

  • @ref: 44016
  • sample type: a salt water beach
  • geographic location: Kalpin, Xinjiang
  • country: China
  • origin.country: CHN
  • continent: Asia

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Coast

Sequence information

16S sequences

  • @ref: 44016
  • description: 16S rRNA gene sequence
  • accession: KX021818
  • database: nuccore

GC content

  • @ref: 44016
  • GC-content: 69.3
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 44016

culture collection no.: CCTCC AA 2015028, KCTC 39667, TRM 46509

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny29034858Streptomyces kalpinensis sp. nov., an actinomycete isolated from a salt water beach.Ma GQ, Xia ZF, Wan CX, Zhang Y, Luo XX, Zhang LLInt J Syst Evol Microbiol10.1099/ijsem.0.0021252017Actinobacteria/genetics, Bacterial Typing Techniques, Base Composition, Bathing Beaches, China, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Seawater/*microbiology, Sequence Analysis, DNA, Streptomyces/*classification/genetics/isolation & purification, Vitamin K 2/analogs & derivatives/chemistryTranscriptome
Phylogeny33470928Streptomyces scabichelini sp. nov., isolated from soil.Gencbay T, Saygin H, Guven K, Topkara AR, Saricaoglu S, Sahin N, Isik KInt J Syst Evol Microbiol10.1099/ijsem.0.0046392021Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Genes, Bacterial, Multilocus Sequence Typing, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Streptomyces/*classification/isolation & purification, Turkey, Vitamin K 2/analogs & derivatives/chemistryTranscriptome

Reference

@idauthorstitledoi/urljournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
44016Guo-Quan Ma, Zhan-Feng Xia, Chuan-Xing Wan, Yao Zhang, Xiao-Xia Luo, Li-Li ZhangStreptomyces kalpinensis sp. nov., an actinomycete isolated from a salt water beach10.1099/ijsem.0.002125IJSEM 67: 4892-4896 201729034858