Archive BacDiveID:10.13145/bacdive140853.20230509.8.1

Strain identifier

BacDive ID: 140853

Type strain:

Species: Streptomyces andamanensis

Strain Designation: KC-112

Strain history: <- Somboon Tanasupawat, KC-112

NCBI tax ID(s): 1565035 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 67661

BacDive-ID: 140853

DSM-Number: 112674

keywords: 16S sequence, Bacteria, aerobe, spore-forming, Gram-positive

description: Streptomyces andamanensis KC-112 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from Soil collected from Similan Islands .

NCBI tax id

NCBI tax id: 1565035
Matching level: species

strain history

@ref: 67771
history: <- Somboon Tanasupawat, KC-112

doi: 10.13145/bacdive140853.20230509.8.1

Name and taxonomic classification

LPSN

@ref: 20215
description: domain/bacteria
keyword: phylum/actinomycetota
domain: Bacteria
phylum: Actinomycetota
class: Actinomycetes
order: Kitasatosporales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces andamanensis
full scientific name: Streptomyces andamanensis Sripreechasak et al. 2016

@ref: 67661

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Streptomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces andamanensis

full scientific name: Streptomyces andamanensis Sripreechasak et al. 2016

strain designation: KC-112

type strain: yes

Morphology

cell morphology

@ref: 43664
gram stain: positive

Culture and growth conditions

culture medium

@ref	name	growth	link	composition
67661	STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)	yes	https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium252.pdf
67661	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)	yes	https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf
67661	ISP2 MEDIUM (DSMZ Medium 987)	yes	https://mediadive.dsmz.de/medium/987	Name: ISP 2 MEDIUM (DSMZ Medium 987) Composition: Agar 20.0 g/l Malt extract 10.0 g/l Dextrose 4.0 g/l Yeast extract 4.0 g/l Distilled water
67661	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	yes	https://mediadive.dsmz.de/medium/65	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

@ref	growth	type	temperature	range
43664	positive	growth	15-40
67661	positive	growth	28	mesophilic
67771	positive	growth	28	mesophilic

culture pH

@ref: 43664
ability: positive
type: growth
pH: 5-10
PH range: alkaliphile

Physiology and metabolism

oxygen tolerance

@ref	oxygen tolerance
43664	aerobe
67771	aerobe

spore formation

@ref: 43664
spore description: spore chains with a smooth surface and oval shaped spores
spore formation: yes

halophily

@ref: 43664
salt: NaCl
growth: positive
tested relation: growth
concentration: 0-9 %(w/v)

metabolite utilization

@ref	Chebi-ID	metabolite	utilization activity	kind of utilization tested
43664	62345	L-rhamnose	-	assimilation
43664	28053	melibiose	-	assimilation
43664	17268	myo-inositol	-	assimilation
43664	28017	starch	-	hydrolysis
43664	17632	nitrate	-	reduction
43664	16899	D-mannitol	+	assimilation
43664	17234	glucose	+	assimilation
43664	18222	xylose	+	assimilation
43664	16634	raffinose	+/-	assimilation
43664	5291	gelatin	+/-	hydrolysis

Isolation, sampling and environmental information

isolation

@ref	sample type	geographic location	country	origin.country	continent
43664	Soil collected from Similan Islands (National Park)	Phang-Nga Province	Thailand	THA	Asia
67661	soil	Phang-Nga Province	Thailand	THA	Asia
67771	Soil		Thailand	THA	Asia

isolation source categories

Cat1: #Environmental
Cat2: #Terrestrial
Cat3: #Soil

Safety information

risk assessment

@ref: 67661
biosafety level: 1
biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@ref: 43664
description: 16S rRNA gene sequence
accession: LC008305
database: nuccore

GC content

@ref: 67661
GC-content: 73
method: high performance liquid chromatography (HPLC)

External links

@ref: 67661

culture collection no.: KCTC 29502, NBRC 110085, PCU 347, TISTR 2401, DSM 112674

straininfo link

@ref: 96799
straininfo: 404866

literature

topic: Phylogeny
Pubmed-ID: 26908169
title: Streptomyces andamanensis sp. nov., isolated from soil.
authors: Sripreechasak P, Tamura T, Shibata C, Suwanborirux K, Tanasupawat S
journal: Int J Syst Evol Microbiol
DOI: 10.1099/ijsem.0.000987
year: 2016
mesh: Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Glycolipids/chemistry, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Streptomyces/*classification/genetics/isolation & purification, Thailand, Vitamin K 2/analogs & derivatives/chemistry
topic2: Transcriptome

Reference

@id	authors	title	doi/url	journal	pubmed	catalogue
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ	10.1099/ijsem.0.004332
43664	Paranee Sripreechasak, Tomohiko Tamura, Chiyo Shibata, Khanit Suwanborirux, Somboon Tanasupawat	Streptomyces andamanensis sp. nov., isolated from soil	10.1099/ijsem.0.000987	IJSEM 66: 2030-2034 2016	26908169
67661	Curators of the DSMZ		https://www.dsmz.de/collection/catalogue/details/culture/DSM-112674			Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 112674)
67771	Curators of the KCTC		https://kctc.kribb.re.kr/En/Kctc
96799	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.	StrainInfo: A central database for resolving microbial strain identifiers	10.60712/SI-ID404866.1