Strain identifier

BacDive ID: 140802

Type strain: Yes

Species: Kosakonia oryzendophytica

Strain Designation: REICA_082

Culture col. no.: LMG 26432, NCCB 100390

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General

@ref: 43582

BacDive-ID: 140802

keywords: genome sequence, Bacteria

description: Kosakonia oryzendophytica REICA_082 is a bacterium of the family Enterobacteriaceae.

doi: 10.13145/bacdive140802.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/proteobacteria
  • domain: Bacteria
  • phylum: Proteobacteria
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Enterobacteriaceae
  • genus: Kosakonia
  • species: Kosakonia oryzendophytica
  • full scientific name: Kosakonia oryzendophytica (Hardoim et al. 2015) Li et al. 2016
  • synonyms

    • @ref: 20215
    • synonym: Enterobacter oryzendophyticus

@ref: 43582

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacterales

family: Enterobacteriaceae

genus: Kosakonia

species: Kosakonia oryzendophytica

strain designation: REICA_082

type strain: yes

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
4358217148putrescine-carbon source
4358218333D-arabitol+carbon source
4358218287L-fucose+carbon source
4358228053melibiose+carbon source
4358217268myo-inositol+carbon source
4358216634raffinose+carbon source
4358232528turanose+carbon source
435824853esculin+hydrolysis

enzymes

@refvalueactivityec
43582arginine dihydrolase+3.5.3.6
43582lysine decarboxylase-4.1.1.18
43582ornithine decarboxylase+4.1.1.17

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Kosakonia oryzendophytica REICA_082GCA_900094925scaffoldncbi1005665
66792Kosakonia oryzendophytica Kosakonia oryzendophytica LMG 26432TGCA_900185945contigncbi1005665
66792Kosakonia oryzendophytica strain Kosakonia oryzendophytica LMG 26432T1005665.5wgspatric1005665
66792Kosakonia oryzendophytica strain REICA_0821005665.7wgspatric1005665
66792Kosakonia oryzendophytica REICA_0822617270737permanentimg1005665

External links

@ref: 43582

culture collection no.: LMG 26432, NCCB 100390

Reference

@idauthorstitledoi/urljournal
20215D.Gleim, M.Kracht, N.Weiss et. al.Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes sincehttp://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.html
43582Chun Yan Li, Yuan Liang Zhou, Jing Ji, Chun Tao GuReclassification of Enterobacter oryziphilus and Enterobacter oryzendophyticus as Kosakonia oryziphila comb. nov. and Kosakonia oryzendophytica comb. nov.10.1099/ijsem.0.001054IJSEM 66: 2780-2783 2016
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes