General

@ref: 43060

BacDive-ID: 140453

DSM-Number: 22189

keywords: 16S sequence, Bacteria, mesophilic

description: Cerasicoccus frondis YM31-066 is a mesophilic bacterium that was isolated from piece of dystrophic leaf in seawater .

NCBI tax id

• NCBI tax id: 490090
• Matching level: species

strain history

• @ref: 43060
• history: <- H. Kasai, Kitasato Univ., Kamaishi, Iwate, Japan; MBIC 24796 <- Y. Matsuo

doi: 10.13145/bacdive140453.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/verrucomicrobiota
• domain: Bacteria
• phylum: Verrucomicrobiota
• class: Opitutia
• order: Puniceicoccales
• family: Puniceicoccaceae
• genus: Cerasicoccus
• species: Cerasicoccus frondis
• full scientific name: Cerasicoccus frondis Yoon et al. 2010

@ref: 43060

domain: Bacteria

phylum: Verrucomicrobia

class: Opitutae

order: Puniceicoccales

family: Puniceicoccaceae

genus: Cerasicoccus

species: Cerasicoccus frondis

full scientific name: Cerasicoccus frondis Yoon et al. 2010

strain designation: YM31-066

type strain: yes

Culture and growth conditions

culture medium

• @ref: 43060
• name: HALF STRENGTH R2A MEDIUM IN 75% SEAWATER (DSMZ Medium 1320)
• growth: yes
• link: https://mediadive.dsmz.de/medium/1320
• composition: Name: HALF STRENGTH R2A MEDIUM IN 75% SEAWATER (DSMZ Medium 1320) Composition: Agar 15.0 g/l Yeast extract 0.5 g/l Proteose peptone 0.5 g/l Casamino acids 0.5 g/l Glucose 0.5 g/l Starch 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water

culture temp

• @ref: 43060
• growth: positive
• type: growth
• temperature: 28-37
• range: mesophilic

Isolation, sampling and environmental information

isolation

• @ref: 43060
• sample type: piece of dystrophic leaf in seawater (marine lake)
• geographic location: Ulong Island
• country: Palau
• origin.country: PLW
• continent: Australia and Oceania

isolation source categories

taxonmaps

• @ref: 69479
• File name: preview.99_125935.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_4963;96_22554;97_29735;98_84539;99_125935&stattab=map
• Last taxonomy: Cerasicoccus frondis subclade
• 16S sequence: AB372850
• Sequence Identity:
• Total samples: 22
• soil counts: 5
• aquatic counts: 17

Sequence information

16S sequences

• @ref: 43060
• description: Cerasicoccus frondis gene for 16S rRNA, partial sequence, strain: YM31-066
• accession: AB372850
• length: 1455
• database: ena
• NCBI tax ID: 490090

GC content

• @ref: 43060
• GC-content: 56.8
• method: high performance liquid chromatography (HPLC)

External links

@ref: 43060

culture collection no.: DSM 22189, MBIC 24796

literature

• topic: Phylogeny
• Pubmed-ID: 20647678
• title: Cerasicoccus maritimus sp. nov. and Cerasicoccus frondis sp. nov., two peptidoglycan-less marine verrucomicrobial species, and description of Verrucomicrobia phyl. nov., nom. rev.
• authors: Yoon J, Matsuo Y, Matsuda S, Kasai H, Yokota A
• journal: J Gen Appl Microbiol
• DOI: 10.2323/jgam.56.213
• year: 2010
• mesh: Bacteria/chemistry/*classification/genetics, Cell Wall/chemistry, Peptidoglycan/analysis, Phylogeny

Reference