General

@ref: 43058

BacDive-ID: 140451

DSM-Number: 25588

keywords: 16S sequence, Bacteria, mesophilic

description: Pseudoalteromonas xishaensis E418 is a mesophilic bacterium that was isolated from spines on the body surface of a starfish .

NCBI tax id

• NCBI tax id: 1131609
• Matching level: species

strain history

• @ref: 43058
• history: <- W. Wei, Third Inst. Oceanography, State Oceanic Admin., China; E418 <- P. Luo

doi: 10.13145/bacdive140451.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/pseudomonadota
• domain: Bacteria
• phylum: Pseudomonadota
• class: Gammaproteobacteria
• order: Alteromonadales
• family: Pseudoalteromonadaceae
• genus: Pseudoalteromonas
• species: Pseudoalteromonas xishaensis
• full scientific name: Pseudoalteromonas xishaensis Luo et al. 2013

@ref: 43058

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Alteromonadales

family: Pseudoalteromonadaceae

genus: Pseudoalteromonas

species: Pseudoalteromonas xishaensis

full scientific name: Pseudoalteromonas xishaensis Luo et al. 2013

strain designation: E418

type strain: yes

Culture and growth conditions

culture medium

• @ref: 43058
• name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
• growth: yes
• link: https://mediadive.dsmz.de/medium/514
• composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

culture temp

• @ref: 43058
• growth: positive
• type: growth
• temperature: 25
• range: mesophilic

Isolation, sampling and environmental information

isolation

• @ref: 43058
• sample type: spines on the body surface of a starfish (Acanthaster planci)
• host species: Acanthaster planci
• geographic location: Hainan province, Xisha island (N 16° 58' 28.79'', E 112° 16' 58.05'')
• country: China
• origin.country: CHN
• continent: Asia
• latitude: 16.9747
• longitude: 112.283

isolation source categories

• Cat1: #Host
• Cat2: #Invertebrates (Other)
• Cat3: #Echinodermata

Sequence information

16S sequences

• @ref: 43058
• description: Pseudoalteromonas sp. E418 16S ribosomal RNA gene, partial sequence
• accession: JQ237129
• length: 1450
• database: ena
• NCBI tax ID: 1131609

GC content

• @ref: 43058
• GC-content: 46.7
• method: high performance liquid chromatography (HPLC)

External links

@ref: 43058

culture collection no.: DSM 25588, CCTCC AB 2011177, NBRC 108846

literature

• topic: Phylogeny
• Pubmed-ID: 24022397
• title: Pseudoalteromonas xishaensis sp. nov., isolated from Acanthaster planci in the Xisha islands.
• authors: Luo P, Wang W, Wang Y, Hu C, He X
• journal: Antonie Van Leeuwenhoek
• DOI: 10.1007/s10482-013-9987-0
• year: 2013
• mesh: Animals, Bacterial Typing Techniques, Base Composition, China, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Enzymes/analysis, Fatty Acids/analysis, Flagella/physiology, Hydrogen-Ion Concentration, Islands, Locomotion, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, Pseudoalteromonas/*classification/genetics/*isolation & purification/physiology, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sodium Chloride/metabolism, Starfish/*microbiology, Temperature
• topic2: Enzymology

Reference