General

@ref: 42975

BacDive-ID: 140368

DSM-Number: 100781

keywords: 16S sequence, Bacteria, mesophilic

description: Neptuniibacter pectenicola DSM 100781 is a mesophilic bacterium that was isolated from larvae of scallop in a hatchery.

NCBI tax id

• NCBI tax id: 1806669
• Matching level: species

strain history

• @ref: 42975
• history: <- A. López Diéguez, University of Santiago de Compostela, Spain; LFT 1.8

doi: 10.13145/bacdive140368.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/pseudomonadota
• domain: Bacteria
• phylum: Pseudomonadota
• class: Gammaproteobacteria
• order: Oceanospirillales
• family: Oceanospirillaceae
• genus: Neptuniibacter
• species: Neptuniibacter pectenicola
• full scientific name: Neptuniibacter pectenicola Diéguez et al. 2017

@ref: 42975

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Oceanospirillales

family: Oceanospirillaceae

genus: Neptuniibacter

species: Neptuniibacter pectenicola

full scientific name: Neptuniibacter pectenicola Diéguez et al. 2017

type strain: yes

Culture and growth conditions

culture medium

• @ref: 42975
• name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
• growth: yes
• link: https://mediadive.dsmz.de/medium/514
• composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

culture temp

• @ref: 42975
• growth: positive
• type: growth
• temperature: 25
• range: mesophilic

Isolation, sampling and environmental information

isolation

• @ref: 42975
• sample type: larvae of scallop (Pecten maximus) in a hatchery
• host species: Pecten maximus
• geographic location: Bergen (60° 30' 53.77'' N 4° 54' 14.75'' W)
• country: Norway
• origin.country: NOR
• continent: Europe
• latitude: 60.5149
• longitude: -4.9041

isolation source categories

taxonmaps

• @ref: 69479
• File name: preview.99_4664.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_240;96_2255;97_2730;98_3388;99_4664&stattab=map
• Last taxonomy: Neptuniibacter
• 16S sequence: LT549010
• Sequence Identity:
• Total samples: 1517
• soil counts: 62
• aquatic counts: 1257
• animal counts: 194
• plant counts: 4

Safety information

risk assessment

• @ref: 42975
• biosafety level: 1
• biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

• @ref: 42975
• description: Neptuniibacter sp. CECT 8936 partial 16S rRNA gene, type strain CECT 8936T
• accession: LT549010
• length: 1363
• database: ena
• NCBI tax ID: 1806669

GC content

• @ref: 42975
• GC-content: 45.7
• method: fluorimetric

External links

@ref: 42975

culture collection no.: DSM 100781, CECT 8936, LFT 1.8

straininfo link

• @ref: 96666
• straininfo: 400870

literature

• topic: Phylogeny
• Pubmed-ID: 28040300
• title: Neptuniibacter pectenicola sp. nov. and Neptuniibacter marinus sp. nov., two novel species isolated from a Great scallop (Pecten maximus) hatchery in Norway and emended description of the genus Neptuniibacter.
• authors: Dieguez AL, Balboa S, Magnesen T, Romalde JL
• journal: Syst Appl Microbiol
• DOI: 10.1016/j.syapm.2016.12.002
• year: 2016
• mesh: Aerobiosis, Animals, Bacterial Typing Techniques, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, DNA-Directed RNA Polymerases/genetics, Locomotion, Norway, Nucleic Acid Hybridization, Oceanospirillaceae/*classification/genetics/*isolation & purification/physiology, Pecten/*microbiology, Phospholipids/analysis, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA
• topic2: Transcriptome

Reference