Strain identifier
BacDive ID: 140274
Type strain: 
Species: Romboutsia sp.
Strain Designation: A6c, LA1
Strain history: <- B. Bright, AgResearch Limited, Ruakura Res. Centre, Hamilton, New Zealand; LA1 (Clostridium ruminantium) <- D. M. Broda and J. A. Boerema {1996}
NCBI tax ID(s): 1965302 (species)
General
@ref: 42881
BacDive-ID: 140274
DSM-Number: 22025
keywords: 16S sequence, Bacteria, mesophilic
description: Romboutsia sp. A6c is a mesophilic bacterium that was isolated from Faeces of slaughtered lambs.
NCBI tax id
- NCBI tax id: 1965302
- Matching level: species
strain history
- @ref: 42881
- history: <- B. Bright, AgResearch Limited, Ruakura Res. Centre, Hamilton, New Zealand; LA1 (Clostridium ruminantium) <- D. M. Broda and J. A. Boerema {1996}
doi: 10.13145/bacdive140274.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Clostridiaceae
- genus: Romboutsia
- species: Romboutsia sp.
- full scientific name: Romboutsia Gerritsen et al. 2014
@ref: 42881
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Clostridiales
family: Clostridiaceae
genus: Romboutsia
species: Romboutsia sp.
full scientific name: Romboutsia sp.
strain designation: A6c, LA1
type strain: no
Culture and growth conditions
culture medium
- @ref: 42881
- name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110)
- growth: yes
- link: https://mediadive.dsmz.de/medium/110
- composition: Name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110) Composition: Ground beef 500.0 g/l Casitone 30.0 g/l Agar 15.0 g/l K2HPO4 5.0 g/l Yeast extract 5.0 g/l D-Glucose 4.0 g/l Starch 1.0 g/l Maltose 1.0 g/l Cellobiose 1.0 g/l L-Cysteine HCl 0.5 g/l Ethanol 0.19 g/l Vitamin K3 0.05 g/l Hemin 0.005 g/l Sodium resazurin 0.0005 g/l Vitamin K1 NaOH Distilled water
culture temp
- @ref: 42881
- growth: positive
- type: growth
- temperature: 25
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 42881
- sample type: Faeces of slaughtered lambs
- geographic location: Christchurch
- country: New Zealand
- origin.country: NZL
- continent: Australia and Oceania
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Mammals | #Caprinae (Sheep/Goat) |
| #Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
taxonmaps
- @ref: 69479
- File name: preview.99_3844.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_2;96_2;97_2372;98_2928;99_3844&stattab=map
- Last taxonomy: Romboutsia
- 16S sequence: EU089964
- Sequence Identity:
- Total samples: 34835
- soil counts: 1271
- aquatic counts: 1623
- animal counts: 31627
- plant counts: 314
Sequence information
16S sequences
- @ref: 42881
- description: Romboutsia sp. LA1 16S ribosomal RNA gene, partial sequence
- accession: EU089964
- length: 1468
- database: ena
- NCBI tax ID: 479907
External links
@ref: 42881
culture collection no.: DSM 22025
straininfo link
- @ref: 96580
- straininfo: 399891
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 42881 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-22025 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 22025) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 96580 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID399891.1 |