Strain identifier

BacDive ID: 140014

Type strain: No

Species: Paenibacillus sp.

Strain Designation: R-19253, IDA10393

Strain history: <- J. Heyrman, Lab. Microbiology, Ghent Univ., Belgium; LMG 23880 <- A. Felske; IDA10393

NCBI tax ID(s): 58172 (species)

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General

@ref: 42622

BacDive-ID: 140014

DSM-Number: 19454

keywords: 16S sequence, Bacteria, mesophilic

description: Paenibacillus sp. R-19253 is a mesophilic bacterium that was isolated from grassland soil.

NCBI tax id

  • NCBI tax id: 58172
  • Matching level: species

strain history

  • @ref: 42622
  • history: <- J. Heyrman, Lab. Microbiology, Ghent Univ., Belgium; LMG 23880 <- A. Felske; IDA10393

doi: 10.13145/bacdive140014.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Paenibacillaceae
  • genus: Paenibacillus
  • species: Paenibacillus sp.
  • full scientific name: Paenibacillus Ash et al. 1994
  • synonyms

    • @ref: 20215
    • synonym: Aerobacillus

@ref: 42622

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Paenibacillaceae

genus: Paenibacillus

species: Paenibacillus sp.

full scientific name: Paenibacillus sp.

strain designation: R-19253, IDA10393

type strain: no

Culture and growth conditions

culture medium

  • @ref: 42622
  • name: CASO AGAR (MERCK 105458) (DSMZ Medium 220)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/220
  • composition: Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water

culture temp

  • @ref: 42622
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 42622
  • sample type: grassland soil
  • country: Netherlands
  • origin.country: NLD
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Grassland
#Environmental#Terrestrial#Soil

taxonmaps

  • @ref: 69479
  • File name: preview.99_40262.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15358;96_3924;97_4827;98_29397;99_40262&stattab=map
  • Last taxonomy: Paenibacillus
  • 16S sequence: AM745264
  • Sequence Identity:
  • Total samples: 359
  • soil counts: 324
  • aquatic counts: 8
  • animal counts: 10
  • plant counts: 17

Sequence information

16S sequences

  • @ref: 42622
  • description: Paenibacillus glebae partial 16S rRNA gene, type strain LMG 23880T
  • accession: AM745264
  • length: 1499
  • database: ena
  • NCBI tax ID: 446369

External links

@ref: 42622

culture collection no.: DSM 19454, LMG 23880

straininfo link

  • @ref: 96442
  • straininfo: 399114

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
42622Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-19454Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 19454)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
96442Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID399114.1