Strain identifier
BacDive ID: 140003
Type strain: 
Species: Halomonas sp.
Strain Designation: H1
Strain history: <- D. Zhu, Jiangsu Univ., Zhenjiang, People's Republic of China; H1
NCBI tax ID(s): 1486246 (species)
version 9.2 (current version)
General
@ref: 42611
BacDive-ID: 140003
DSM-Number: 26132
keywords: 16S sequence, Bacteria, mesophilic
description: Halomonas sp. H1 is a mesophilic bacterium that was isolated from sediment.
NCBI tax id
- NCBI tax id: 1486246
- Matching level: species
strain history
- @ref: 42611
- history: <- D. Zhu, Jiangsu Univ., Zhenjiang, People's Republic of China; H1
doi: 10.13145/bacdive140003.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Oceanospirillales
- family: Halomonadaceae
- genus: Halomonas
- species: Halomonas sp.
- full scientific name: Halomonas Vreeland et al. 1980
synonyms
@ref synonym 20215 Bisbaumannia 20215 Vreelandella 20215 Onishia 20215 Franzmannia 20215 Deleya 20215 Billgrantia 20215 Litchfieldella 20215 Volcaniella
@ref: 42611
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Oceanospirillales
family: Halomonadaceae
genus: Halomonas
species: Halomonas sp.
full scientific name: Halomonas sp.
strain designation: H1
type strain: no
Culture and growth conditions
culture medium
- @ref: 42611
- name: MEDIUM 514 PLUS ADDITIONAL SALT (DSMZ Medium 514b)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514b
- composition: Name: MEDIUM 514 plus additional salt (DSMZ Medium 514b; with strain-specific modifications) Composition: NaCl 30.0 g/l Agar 17.5 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
culture temp
- @ref: 42611
- growth: positive
- type: growth
- temperature: 28
Isolation, sampling and environmental information
isolation
- @ref: 42611
- sample type: sediment
- geographic location: South China Sea
- country: China
- origin.country: CHN
- continent: Asia
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Sediment |
| #Environmental | #Terrestrial | #Sediment |
taxonmaps
- @ref: 69479
- File name: preview.99_62636.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_48;96_2666;97_9055;98_11107;99_62636&stattab=map
- Last taxonomy: Halomonas
- 16S sequence: JQ044787
- Sequence Identity:
- Total samples: 19
- soil counts: 14
- aquatic counts: 4
- animal counts: 1
Sequence information
16S sequences
- @ref: 42611
- description: Halomonas sp. H1(2012) 16S ribosomal RNA gene, partial sequence
- accession: JQ044787
- length: 1438
- database: nuccore
- NCBI tax ID: 1134412
External links
@ref: 42611
culture collection no.: DSM 26132
straininfo link
- @ref: 96432
- straininfo: 402399
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 42611 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-26132 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26132) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 96432 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID402399.1 |