Strain identifier
BacDive ID: 139822
Type strain:
Species: Thermosipho sp.
Strain Designation: 2F70-1
Strain history: <- H. Dahle, Centre Geobiology, Bergen, Norway; 2F70-1 (Thermosipho arcticus) <- B. O. Steinsbu, Univ. Bergen, Norway {2006}
NCBI tax ID(s): 1968895 (species)
General
@ref: 42430
BacDive-ID: 139822
DSM-Number: 21301
keywords: 16S sequence, Bacteria, thermophilic
description: Thermosipho sp. 2F70-1 is a thermophilic bacterium that was isolated from Hot vent .
NCBI tax id
- NCBI tax id: 1968895
- Matching level: species
strain history
- @ref: 42430
- history: <- H. Dahle, Centre Geobiology, Bergen, Norway; 2F70-1 (Thermosipho arcticus) <- B. O. Steinsbu, Univ. Bergen, Norway {2006}
doi: 10.13145/bacdive139822.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/thermotogota
- domain: Bacteria
- phylum: Thermotogota
- class: Thermotogae
- order: Thermotogales
- family: Fervidobacteriaceae
- genus: Thermosipho
- species: Thermosipho sp.
- full scientific name: Thermosipho Huber et al. 1989
@ref: 42430
domain: Bacteria
phylum: Thermotogae
class: Thermotogae
order: Thermotogales
family: Fervidobacteriaceae
genus: Thermosipho
species: Thermosipho sp.
full scientific name: Thermosipho sp.
strain designation: 2F70-1
type strain: no
Culture and growth conditions
culture medium
- @ref: 42430
- name: METHANOCOCCOIDES MEDIUM (DSMZ Medium 141c)
- growth: yes
- link: https://mediadive.dsmz.de/medium/141c
- composition: Name: METHANOCOCCOIDES MEDIUM (DSMZ Medium 141c; with strain-specific modifications) Composition: NaHCO3 4.89237 g/l MgCl2 x 6 H2O 3.91389 g/l Yeast extract 1.95695 g/l Trypticase peptone 1.95695 g/l Na-acetate 0.978474 g/l Na2S x 9 H2O 0.489237 g/l L-Cysteine HCl x H2O 0.489237 g/l KCl 0.332681 g/l NH4Cl 0.244618 g/l K2HPO4 0.136986 g/l MgSO4 x 7 H2O 0.0293542 g/l Nitrilotriacetic acid 0.0146771 g/l NaCl 0.00978474 g/l MnSO4 x H2O 0.00489237 g/l Fe(NH4)2(SO4)2 x 6 H2O 0.00195695 g/l CoSO4 x 7 H2O 0.00176125 g/l ZnSO4 x 7 H2O 0.00176125 g/l CaCl2 x 2 H2O 0.000978474 g/l FeSO4 x 7 H2O 0.000978474 g/l Sodium resazurin 0.000489237 g/l NiCl2 x 6 H2O 0.000293542 g/l AlK(SO4)2 x 12 H2O 0.000195695 g/l CuSO4 x 5 H2O 9.78474e-05 g/l Pyridoxine hydrochloride 9.78474e-05 g/l Na2MoO4 x 2 H2O 9.78474e-05 g/l H3BO3 9.78474e-05 g/l (DL)-alpha-Lipoic acid 4.89237e-05 g/l Thiamine HCl 4.89237e-05 g/l Riboflavin 4.89237e-05 g/l Nicotinic acid 4.89237e-05 g/l Calcium D-(+)-pantothenate 4.89237e-05 g/l p-Aminobenzoic acid 4.89237e-05 g/l Biotin 1.95695e-05 g/l Folic acid 1.95695e-05 g/l Na2WO4 x 2 H2O 3.91389e-06 g/l Na2SeO3 x 5 H2O 2.93542e-06 g/l Vitamin B12 9.78474e-07 g/l Distilled water
culture temp
- @ref: 42430
- growth: positive
- type: growth
- temperature: 70
- range: thermophilic
Isolation, sampling and environmental information
isolation
- @ref: 42430
- sample type: Hot vent (smoker pipe wall)
- geographic location: Greenland Sea, Jan Mayen part
- country: Norway
- origin.country: NOR
- continent: Europe
- latitude: 71.2981
- longitude: -5.7722
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Condition | #Thermophilic (>45°C) | |
#Environmental | #Aquatic | #Hydrothermal vent |
Sequence information
16S sequences
- @ref: 42430
- description: Thermosipho sp. 2F70-1 16S ribosomal RNA gene, partial sequence
- accession: EU418441
- length: 1475
- database: ena
- NCBI tax ID: 515973
External links
@ref: 42430
culture collection no.: DSM 21301
straininfo link
- @ref: 96265
- straininfo: 406648
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
42430 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-21301 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 21301) | |
96265 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID406648.1 |