Strain identifier

BacDive ID: 139779

Type strain: No

Species: Streptococcus sp.

Strain history: <- M. Hirasawa, Dept. Microbiology & Immunology, Nihon Univ. School of Dentistry at Matsudo, Japan; NUM 1428 <- H. Masatomo

NCBI tax ID(s): 573563 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 42388

BacDive-ID: 139779

DSM-Number: 21998

keywords: 16S sequence, Bacteria, mesophilic

description: Streptococcus sp. DSM 21998 is a mesophilic bacterium that was isolated from Wild boar oral cavity.

NCBI tax id

  • NCBI tax id: 573563
  • Matching level: species

strain history

  • @ref: 42388
  • history: <- M. Hirasawa, Dept. Microbiology & Immunology, Nihon Univ. School of Dentistry at Matsudo, Japan; NUM 1428 <- H. Masatomo

doi: 10.13145/bacdive139779.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Streptococcaceae
  • genus: Streptococcus
  • species: Streptococcus sp.
  • full scientific name: Streptococcus Rosenbach 1884 (Approved Lists 1980)

@ref: 42388

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Streptococcaceae

genus: Streptococcus

species: Streptococcus sp.

full scientific name: Streptococcus sp.

type strain: no

Culture and growth conditions

culture medium

  • @ref: 42388
  • name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/92
  • composition: Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

culture temp

  • @ref: 42388
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6838129016arginine-hydrolysis
6838116988D-ribose-builds acid from
6838116899D-mannitol-builds acid from
6838130911sorbitol-builds acid from
6838117716lactose-builds acid from
6838127082trehalose+builds acid from
6838116634raffinose+builds acid from
6838117992sucrose+builds acid from
6838130849L-arabinose-builds acid from
6838118333D-arabitol-builds acid from
6838140585alpha-cyclodextrin-builds acid from
68381606565hippurate-hydrolysis
6838128087glycogen+builds acid from
6838127941pullulan+builds acid from
6838117306maltose+builds acid from
6838128053melibiose-builds acid from
683816731melezitose-builds acid from
6838116443D-tagatose-builds acid from
6838116199urea-hydrolysis

metabolite production

  • @ref: 68381
  • Chebi-ID: 15688
  • metabolite: acetoin
  • production: yes

metabolite tests

  • @ref: 68381
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: +

enzymes

@refvalueactivityec
68381urease-3.5.1.5
68381beta-mannosidase-3.2.1.25
68381glycyl tryptophan arylamidase-
68381N-acetyl-beta-glucosaminidase-3.2.1.52
68381pyrrolidonyl arylamidase-3.4.19.3
68381beta-galactosidase-3.2.1.23
68381Alanyl-Phenylalanyl-Proline arylamidase+
68381alkaline phosphatase-3.1.3.1
68381alpha-galactosidase-3.2.1.22
68381beta-glucuronidase-3.2.1.31
68381beta-glucosidase+3.2.1.21
68381arginine dihydrolase-3.5.3.6

API rID32STR

@refADH Argbeta GLUbeta GARbeta GURalpha GALPALRIBMANSORLACTRERAFSACLARADARLCDEXVPAPPAbeta GALPyrAbeta NAGGTAHIPGLYGPULMALMELMLZMbeta DGTAGbeta MANURE
42388-+--------+++---++-----+++--+/----

Isolation, sampling and environmental information

isolation

  • @ref: 42388
  • sample type: Wild boar oral cavity
  • country: Japan
  • origin.country: JPN
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Suidae (Pig,Swine)
#Host Body-Site#Oral cavity and airways

Sequence information

16S sequences

  • @ref: 42388
  • description: Streptococcus sp. NUM 1428 gene for 16S rRNA, partial sequence
  • accession: AB469559
  • length: 1551
  • database: ena
  • NCBI tax ID: 573563

External links

@ref: 42388

culture collection no.: DSM 21998, NUM 1428

straininfo link

  • @ref: 96224
  • straininfo: 408330

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
42388Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-21998Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 21998)
68381Automatically annotated from API rID32STR
96224Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID408330.1