Strain identifier
BacDive ID: 139752
Type strain: 
Species: Neisseria zalophi
Strain history: <- D. V. Volokhov, U.S. Food and Drug Administration (FDA), Washington, D.C., USA; CSL 7565
NCBI tax ID(s): 640030 (species)
version 8.1 (current version)
General
@ref: 42363
BacDive-ID: 139752
DSM-Number: 102031
keywords: 16S sequence, Bacteria, psychrophilic
description: Neisseria zalophi DSM 102031 is a psychrophilic bacterium that was isolated from oral swap from Californian sea lion Zalophus californianus.
NCBI tax id
- NCBI tax id: 640030
- Matching level: species
strain history
- @ref: 42363
- history: <- D. V. Volokhov, U.S. Food and Drug Administration (FDA), Washington, D.C., USA; CSL 7565
doi: 10.13145/bacdive139752.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Neisseriales
- family: Neisseriaceae
- genus: Neisseria
- species: Neisseria zalophi
- full scientific name: Neisseria zalophi Volokhov et al. 2018
@ref: 42363
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Clostridiales
family: Neisseriaceae
genus: Neisseria
species: Neisseria zalophi
full scientific name: Neisseria zalophi Volokhov et al. 2018
type strain: yes
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 42363 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://mediadive.dsmz.de/medium/693 | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
| 42363 | BHI MEDIUM (DSMZ Medium 215) | yes | https://mediadive.dsmz.de/medium/215 | Name: BHI MEDIUM (DSMZ Medium 215) Composition: Brain heart infusion 37.0 g/l Distilled water |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 42363 | positive | growth | 0 | psychrophilic |
| 42363 | positive | growth | 37 | mesophilic |
Isolation, sampling and environmental information
isolation
- @ref: 42363
- sample type: oral swap from Californian sea lion Zalophus californianus
- host species: Zalophus californianus
- geographic location: California, Sausalito, Marine Mammal Center facilities
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Mammals | #Aquatic mammal |
| #Host Body-Site | #Oral cavity and airways |
Sequence information
16S sequences
- @ref: 42363
- description: Neisseria zalophi 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence
- accession: FJ876273
- length: 2633
- database: ena
- NCBI tax ID: 640030
External links
@ref: 42363
culture collection no.: DSM 102031, ATCC BAA2455, CSL 7565
straininfo link
- @ref: 96199
- straininfo: 397437
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 29508031 | Neisseria zalophi sp. nov., isolated from oral cavity of California sea lions (Zalophus californianus). | Volokhov DV, Amselle M, Bodeis-Jones S, Delmonte P, Zhang S, Davidson MK, Gulland FM, Chizhikov VE | Arch Microbiol | 10.1007/s00203-018-1499-x | 2018 | Animals, Base Composition, DNA, Bacterial/genetics, Fatty Acids/analysis, Genotype, Molecular Typing, Mouth/*microbiology, Neisseria/*genetics/isolation & purification, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics, Sea Lions/*microbiology, Sequence Analysis, DNA | Genetics |
| Phylogeny | 30798492 | Neisseria chenwenguii sp. nov. isolated from the rectal contents of a plateau pika (Ochotona curzoniae). | Zhang G, Yang J, Lai XH, Lu S, Jin D, Pu J, Bai X, Luo X, Xiong Y, Huang Y, Chen C, Xu J | Antonie Van Leeuwenhoek | 10.1007/s10482-019-01234-2 | 2019 | Animals, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry/metabolism, Lagomorpha/*microbiology, Neisseria/classification/genetics/*isolation & purification/metabolism, Phylogeny, RNA, Ribosomal, 16S/genetics, Rectum/*microbiology, Tibet | Metabolism |
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 42363 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-102031 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 102031) | |
| 96199 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID397437.1 |