Strain identifier
BacDive ID: 139736
Type strain: 
Species: Cytophaga sp.
Strain Designation: 174
Strain history: <- I. Pagnier, URMITE, 27 bd Jean Moulin, 13385 Marseille Cedex 05, France; 174
NCBI tax ID(s): 29535 (species)
version 8.1 (current version)
General
@ref: 42347
BacDive-ID: 139736
DSM-Number: 26352
keywords: 16S sequence, Bacteria, mesophilic
description: Cytophaga sp. 174 is a mesophilic bacterium that was isolated from environmental water .
NCBI tax id
- NCBI tax id: 29535
- Matching level: species
strain history
- @ref: 42347
- history: <- I. Pagnier, URMITE, 27 bd Jean Moulin, 13385 Marseille Cedex 05, France; 174
doi: 10.13145/bacdive139736.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Cytophagia
- order: Cytophagales
- family: Cytophagaceae
- genus: Cytophaga
- species: Cytophaga sp.
- full scientific name: Cytophaga Winogradsky 1929 (Approved Lists 1980)
@ref: 42347
domain: Bacteria
phylum: Bacteroidetes
class: Cytophagia
order: Cytophagales
family: Cytophagaceae
genus: Cytophaga
species: Cytophaga sp.
full scientific name: Cytophaga sp.
strain designation: 174
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 42347 | SERPULINA MURDOCHII MEDIUM (DSMZ Medium 840) | yes | https://mediadive.dsmz.de/medium/840 | Name: SERPULINA MURDOCHII MEDIUM (DSMZ Medium 840) Composition: NaHCO3 0.03 g/l Glucose 0.015 g/l Bovine serum Air Trypticase soy broth |
| 42347 | R2A MEDIUM (DSMZ Medium 830) | yes | https://mediadive.dsmz.de/medium/830 | Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water |
culture temp
- @ref: 42347
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 42347
- sample type: environmental water (fountain)
- geographic location: Aubagne
- country: France
- origin.country: FRA
- continent: Europe
isolation source categories
- Cat1: #Environmental
- Cat2: #Aquatic
taxonmaps
- @ref: 69479
- File name: preview.99_36341.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_66;96_5013;97_21369;98_26800;99_36341&stattab=map
- Last taxonomy: Flavobacterium
- 16S sequence: EF394924
- Sequence Identity:
- Total samples: 997
- soil counts: 51
- aquatic counts: 498
- animal counts: 359
- plant counts: 89
Sequence information
16S sequences
- @ref: 42347
- description: Candidatus Cytophaga massiliensis strain URCM1 16S ribosomal RNA gene, partial sequence
- accession: EF394924
- length: 1449
- database: ena
- NCBI tax ID: 1205731
External links
@ref: 42347
culture collection no.: DSM 26352
straininfo link
- @ref: 96188
- straininfo: 407434
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 42347 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-26352 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26352) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 96188 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID407434.1 |