Strain identifier

BacDive ID: 13971

Type strain: No

Species: Nitrospirillum amazonense

Strain Designation: Am 30, Y-6

Strain history: <- ATCC <- N.R. Krieg, Y-6 <- J. Döbereiner

NCBI tax ID(s): 28077 (species)

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General

@ref: 1229

BacDive-ID: 13971

DSM-Number: 2789

keywords: Bacteria, mesophilic

description: Nitrospirillum amazonense Am 30 is a mesophilic bacterium that was isolated from Pennisetum purpureum cv Cameron roots.

NCBI tax id

  • NCBI tax id: 28077
  • Matching level: species

strain history

  • @ref: 1229
  • history: <- ATCC <- N.R. Krieg, Y-6 <- J. Döbereiner

doi: 10.13145/bacdive13971.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Rhodospirillales
  • family: Azospirillaceae
  • genus: Nitrospirillum
  • species: Nitrospirillum amazonense
  • full scientific name: Nitrospirillum amazonense (Magalhães et al. 1984) Lin et al. 2015

  • synonyms

    • @ref: 20215
    • synonym: Azospirillum amazonense

@ref: 1229

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhodospirillales

family: Azospirillaceae

genus: Nitrospirillum

species: Nitrospirillum amazonense

full scientific name: Nitrospirillum amazonense (Magalhães et al. 1984) Lin et al. 2015

strain designation: Am 30, Y-6

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
1229HETEROTROPHIC MEDIUM H3P (DSMZ Medium 428)yeshttps://mediadive.dsmz.de/medium/428Name: HETEROTROPHIC MEDIUM H3P (DSMZ Medium 428) Composition: Agar 19.802 g/l Na2HPO4 x 2 H2O 2.87129 g/l KH2PO4 2.27723 g/l D-Glucose 1.9802 g/l Na-lactate 0.990099 g/l Na-pyruvate 0.990099 g/l D-Mannitol 0.990099 g/l DL-Malate 0.990098 g/l Na-acetate 0.990098 g/l Yeast extract 0.990098 g/l NH4Cl 0.990098 g/l Disodium succinate 0.990098 g/l MgSO4 x 7 H2O 0.495049 g/l Ferric ammonium citrate 0.049505 g/l CaCl2 x 2 H2O 0.00990098 g/l NaVO3 x H2O 0.00495049 g/l Thiamine-HCl x 2 H2O 0.00247525 g/l Nicotinic acid 0.00247525 g/l Pyridoxine hydrochloride 0.00247525 g/l Calcium pantothenate 0.00247525 g/l H3BO3 0.00148515 g/l CoCl2 x 6 H2O 0.000990099 g/l Riboflavin 0.00049505 g/l ZnSO4 x 7 H2O 0.00049505 g/l MnCl2 x 4 H2O 0.000148515 g/l Na2MoO4 x 2 H2O 0.000148515 g/l NiCl2 x 6 H2O 9.90099e-05 g/l CuCl2 x 2 H2O 4.95049e-05 g/l Vitamin B12 4.95049e-05 g/l Folic acid 9.90099e-06 g/l Biotin 4.9505e-06 g/l Distilled water
1229MINERAL MEDIUM FOR CHEMOLITHOTROPHIC GROWTH (H-3) (DSMZ Medium 81)yeshttps://mediadive.dsmz.de/medium/81Name: MINERAL MEDIUM FOR CHEMOLITHOTROPHIC GROWTH (H-3) (DSMZ Medium 81) Composition: Agar 20.1005 g/l Na2HPO4 x 2 H2O 2.91457 g/l KH2PO4 2.31156 g/l NH4Cl 1.00503 g/l MgSO4 x 7 H2O 0.502512 g/l Ferric ammonium citrate 0.0502513 g/l CaCl2 x 2 H2O 0.0100503 g/l NaVO3 x H2O 0.00502512 g/l Calcium pantothenate 0.00251256 g/l Pyridoxine hydrochloride 0.00251256 g/l Nicotinic acid 0.00251256 g/l Thiamine-HCl x 2 H2O 0.00251256 g/l H3BO3 0.00150754 g/l CoCl2 x 6 H2O 0.00100503 g/l Riboflavin 0.000502513 g/l ZnSO4 x 7 H2O 0.000502513 g/l MnCl2 x 4 H2O 0.000150754 g/l Na2MoO4 x 2 H2O 0.000150754 g/l NiCl2 x 6 H2O 0.000100503 g/l CuCl2 x 2 H2O 5.02513e-05 g/l Vitamin B12 5.02513e-05 g/l Folic acid 1.00503e-05 g/l Biotin 5.02513e-06 g/l Distilled water
1229AZOSPIRILLUM AMAZONENSE MEDIUM (DSMZ Medium 352)yeshttps://mediadive.dsmz.de/medium/352Name: AZOSPIRILLUM AMAZONENSE MEDIUM (DSMZ Medium 352) Composition: Sucrose 5.0 g/l Agar 1.75 g/l KH2PO4 0.6 g/l K2HPO4 0.2 g/l MgSO4 x 7 H2O 0.2 g/l Bromothymol blue 0.025 g/l CaCl2 x 2 H2O 0.02 g/l FeCl3 0.01 g/l Na2MoO4 x 2 H2O 0.002 g/l Distilled water

culture temp

  • @ref: 1229
  • growth: positive
  • type: growth
  • temperature: 30

Isolation, sampling and environmental information

isolation

  • @ref: 1229
  • sample type: Pennisetum purpureum cv Cameron roots
  • host species: Pennisetum purpureum
  • country: Brazil
  • origin.country: BRA
  • continent: Middle and South America

isolation source categories

Cat1Cat2Cat3
#Host#Plants#Herbaceous plants (Grass,Crops)
#Host Body-Site#Plant#Root (Rhizome)

Safety information

risk assessment

  • @ref: 1229
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

External links

@ref: 1229

culture collection no.: DSM 2789, ATCC 35121

straininfo link

  • @ref: 83142
  • straininfo: 40883

Reference

@idauthorscataloguedoi/urltitle
1229Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 2789)https://www.dsmz.de/collection/catalogue/details/culture/DSM-2789
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
83142Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID40883.1StrainInfo: A central database for resolving microbial strain identifiers