Strain identifier

BacDive ID: 139613

Type strain: No

Species: Acinetobacter parvus

Strain history: CIP <- 1986, Lab. Ident. Inst. Pasteur, Paris, France: strain 500-86, Acinetobacter sp. <- Inst. Curie, France

NCBI tax ID(s): 134533 (species)

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General

@ref: 42158

BacDive-ID: 139613

keywords: genome sequence, Bacteria, obligate aerobe, mesophilic, Gram-negative

description: Acinetobacter parvus CIP 102529 is an obligate aerobe, mesophilic, Gram-negative bacterium of the family Moraxellaceae.

NCBI tax id

  • NCBI tax id: 134533
  • Matching level: species

strain history

  • @ref: 42158
  • history: CIP <- 1986, Lab. Ident. Inst. Pasteur, Paris, France: strain 500-86, Acinetobacter sp. <- Inst. Curie, France

doi: 10.13145/bacdive139613.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Moraxellaceae
  • genus: Acinetobacter
  • species: Acinetobacter parvus
  • full scientific name: Acinetobacter parvus Nemec et al. 2003

@ref: 42158

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Moraxellaceae

genus: Acinetobacter

species: Acinetobacter parvus

type strain: no

Morphology

cell morphology

@refgram stainconfidencecell shapemotility
69480negative99.955
42158negativerod-shapedno

colony morphology

  • @ref: 42158

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
42158MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
42158CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
42158positivegrowth30mesophilic
42158positivegrowth25-30mesophilic
42158nogrowth41thermophilic
42158nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 42158
  • oxygen tolerance: obligate aerobe

spore formation

@refspore formationconfidence
69481no100
69480no99.919

halophily

@refsaltgrowthtested relationconcentration
42158NaClnogrowth0 %
42158NaClnogrowth2 %
42158NaClnogrowth4 %
42158NaClnogrowth6 %
42158NaClnogrowth8 %
42158NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
4215816947citrate-carbon source
4215817632nitrate-reduction
4215816301nitrite-reduction
4215817234glucose-degradation
4215817632nitrate-respiration

antibiotic resistance

  • @ref: 42158
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
4215815688acetoin-
4215817234glucose-

enzymes

@refvalueactivityec
42158oxidase-
42158beta-galactosidase-3.2.1.23
42158gelatinase-
42158catalase+1.11.1.6
42158gamma-glutamyltransferase-2.3.2.2
42158urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
42158-+++-+----++--------

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
42158----------------------------------------------------------------------------++-------+-------------

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typeisolation date
42158ParisFranceFRAEurope
42158ParisFranceFRAEuropeHuman, Blood1986

Safety information

risk assessment

  • @ref: 42158
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Acinetobacter sp. CIP 102529GCA_000368325scaffoldncbi1144668
66792Acinetobacter sp. CIP 1025291144668.3wgspatric1144668
66792Acinetobacter sp. CIP 1025292565956674draftimg1144668

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
motileno89.11no
flagellatedno94.644no
gram-positiveno97.805no
anaerobicno98.217no
aerobicyes89.718no
halophileno87.574no
spore-formingno96.227no
thermophileno99.751no
glucose-utilno90.661no
glucose-fermentno91.815no

External links

@ref: 42158

culture collection no.: CIP 102529

straininfo link

  • @ref: 96079
  • straininfo: 67095

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
42158Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20102529Collection of Institut Pasteur (CIP 102529)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
68382Automatically annotated from API zym
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1
96079Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID67095.1