Strain identifier

BacDive ID: 139608

Type strain: No

Species: Acinetobacter sp.

Strain history: CIP <- 1956, L. Second, Lab. Ident. Inst. Pasteur, Paris, France, Moraxella lwoffi var. liquefaciens

NCBI tax ID(s): 1144672 (species)

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General

@ref: 42139

BacDive-ID: 139608

keywords: genome sequence, Bacteria, obligate aerobe, mesophilic, Gram-negative

description: Acinetobacter sp. CIP 56.2 is an obligate aerobe, mesophilic, Gram-negative bacterium of the family Moraxellaceae.

NCBI tax id

  • NCBI tax id: 1144672
  • Matching level: species

strain history

@refhistory
421391956, L. Second, Lab. Ident. Inst. Pasteur, Paris, France, Moraxella lwoffi var. liquefaciens
42139CIP <- 1956, L. Second, Lab. Ident. Inst. Pasteur, Paris, France, Moraxella lwoffi var. liquefaciens

doi: 10.13145/bacdive139608.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Moraxellaceae
  • genus: Acinetobacter
  • species: Acinetobacter sp.
  • full scientific name: Acinetobacter Brisou and Prévot 1954 (Approved Lists 1980)

@ref: 42139

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Moraxellaceae

genus: Acinetobacter

species: Acinetobacter sp.

type strain: no

Morphology

cell morphology

@refgram stainconfidencecell shapemotility
69480negative99.967
42139negativerod-shapedno

colony morphology

  • @ref: 42139
  • hemolysis ability: 1

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
42139MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
42139CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
42139positivegrowth30mesophilic
42139positivegrowth10-37
42139nogrowth41thermophilic
42139nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 42139
  • oxygen tolerance: obligate aerobe

spore formation

@refspore formationconfidence
69481no100
69480no99.978

halophily

@refsaltgrowthtested relationconcentration
42139NaClpositivegrowth0-2 %
42139NaClnogrowth6 %
42139NaClnogrowth8 %
42139NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
4213916947citrate+carbon source
4213917632nitrate-reduction
4213916301nitrite-reduction
4213917632nitrate-respiration

antibiotic resistance

  • @ref: 42139
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

  • @ref: 42139
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
4213915688acetoin-
4213917234glucose-

enzymes

@refvalueactivityec
42139oxidase-
42139beta-galactosidase-3.2.1.23
42139gelatinase+
42139catalase+1.11.1.6
42139gamma-glutamyltransferase-2.3.2.2
42139urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase+3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
42139-+++++++--++--------

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
42139------------------------------------------------++---+--------++-+-+-----+-+++-++----+----++++--++-

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typeisolation date
42139RoanneFranceFRAEurope
42139RoanneFranceFRAEuropeHuman, Liver abscess1955

Safety information

risk assessment

  • @ref: 42139
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Acinetobacter sp. CIP 56.2GCA_000368445scaffoldncbi1144672
66792Acinetobacter sp. CIP 56.21144672.3wgspatric1144672
66792Acinetobacter sp. CIP 56.22565956668draftimg1144672

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
motileno90.494no
flagellatedno91.933no
gram-positiveno97.262no
anaerobicno98.455no
aerobicyes94.052no
halophileno89.704no
spore-formingno95.71no
thermophileno99.916yes
glucose-utilno83.849no
glucose-fermentno90.34no

External links

@ref: 42139

culture collection no.: CIP 56.2

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
42139Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2056.2Collection of Institut Pasteur (CIP 56.2)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
68382Automatically annotated from API zym
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1