Strain identifier

BacDive ID: 139607

Type strain: No

Species: Acinetobacter schindleri

Strain history: CIP <- 1985, Lab. Ident. Inst. Pasteur, Paris, France: strain 803-85, Acinetobacter sp. <- Rochefort/Mer Hosp., France, Acinetobacter anitratus

NCBI tax ID(s): 108981 (species)

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General

@ref: 42134

BacDive-ID: 139607

keywords: genome sequence, Bacteria, aerobe, mesophilic, Gram-negative

description: Acinetobacter schindleri CIP 101934 is an aerobe, mesophilic, Gram-negative bacterium of the family Moraxellaceae.

NCBI tax id

  • NCBI tax id: 108981
  • Matching level: species

strain history

  • @ref: 42134
  • history: CIP <- 1985, Lab. Ident. Inst. Pasteur, Paris, France: strain 803-85, Acinetobacter sp. <- Rochefort/Mer Hosp., France, Acinetobacter anitratus

doi: 10.13145/bacdive139607.20250331.9.3

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Moraxellaceae
  • genus: Acinetobacter
  • species: Acinetobacter schindleri
  • full scientific name: Acinetobacter schindleri Nemec et al. 2001

@ref: 42134

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Moraxellaceae

genus: Acinetobacter

species: Acinetobacter schindleri

type strain: no

Morphology

cell morphology

@refgram stainconfidencecell shapemotility
125438negative99.5
125439negative95.8
42134negativerod-shapedno

colony morphology

  • @ref: 42134
  • hemolysis ability: 1

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
42134MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
42134CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperature
42134positivegrowth30
42134positivegrowth10-41
42134nogrowth45

Physiology and metabolism

oxygen tolerance

@refoxygen toleranceconfidence
42134obligate aerobe
125438aerobe90.159
125439obligate aerobe99

spore formation

@refspore formationconfidence
125438no95.653
125439no93.9

halophily

@refsaltgrowthtested relationconcentration
42134NaClpositivegrowth0-4 %
42134NaClnogrowth6 %
42134NaClnogrowth8 %
42134NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
4213416947citrate-carbon source
4213417632nitrate-reduction
4213416301nitrite-reduction
4213417234glucose-degradation
4213417632nitrate-respiration

antibiotic resistance

  • @ref: 42134
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

  • @ref: 42134
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
4213415688acetoin-
4213417234glucose-

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase-3.2.1.21
68382alpha-glucosidase-3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase-
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin-3.4.21.4
68382cystine arylamidase+3.4.11.3
68382valine arylamidase+
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)+
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
42134oxidase-
42134beta-galactosidase-3.2.1.23
42134gelatinase-
42134catalase+1.11.1.6
42134gamma-glutamyltransferase-2.3.2.2
42134urease-3.5.1.5

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
42134-+++++++--+---------

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
42134-------------------------------------------------------------------++------+---+++--------++++--+++

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typeisolation date
42134Rochefort sur merFranceFRAEurope
42134Rochefort sur merFranceFRAEuropeHuman, Blood1985

Safety information

risk assessment

  • @ref: 42134
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Acinetobacter sp. CIP 101934GCA_000369585scaffoldncbi1144661
66792Acinetobacter sp. CIP 1019341144661.3wgspatric1144661
66792Acinetobacter sp. CIP 1019342565956657draftimg1144661

Genome-based predictions

predictions

@refmodeltraitdescriptionpredictionconfidencetraining_data
125439BacteriaNetoxygen_toleranceOxygenic conditions needed for growthobligate aerobe99
125439BacteriaNetgram_stainReaction to gram-stainingnegative95.8
125439BacteriaNetmotilityAbility to perform movementno65.3
125439BacteriaNetspore_formationAbility to form endo- or exosporesno93.9
125438gram-positivegram-positivePositive reaction to Gram-stainingno99.5no
125438anaerobicanaerobicAbility to grow under anoxygenic conditions (including facultative anaerobes)no97.588yes
125438aerobicaerobicAbility to grow under oxygenic conditions (including facultative aerobes)yes90.159no
125438spore-formingspore-formingAbility to form endo- or exosporesno95.653no
125438thermophilethermophilicAbility to grow at temperatures above or equal to 45°Cno99yes
125438motile2+flagellatedAbility to perform flagellated movementno78.722no

External links

@ref: 42134

culture collection no.: CIP 101934

straininfo link

  • @ref: 96075
  • straininfo: 67086

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
42134Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20101934Collection of Institut Pasteur (CIP 101934)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
68382Automatically annotated from API zym
96075Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID67086.1
125438Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg OvermannPredicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets10.1101/2024.08.12.607695
125439Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardydeepG: Deep Learning for Genome Sequence Data. R package version 0.3.1https://github.com/GenomeNet/deepG