Strain identifier
BacDive ID: 139491
Type strain:
Species: Acinetobacter dispersus
Strain history: CIP <- 2012, A. Nemec, Inst. Pasteur, Paris, France: strain NIPH 1867 <- CCUG <- P. Bouvet 942
NCBI tax ID(s): 70348 (species)
version 8.1 (current version)
General
@ref: 41736
BacDive-ID: 139491
keywords: genome sequence, Bacteria, aerobe, mesophilic, Gram-negative
description: Acinetobacter dispersus CIP 110481 is an aerobe, mesophilic, Gram-negative bacterium of the family Moraxellaceae.
NCBI tax id
- NCBI tax id: 70348
- Matching level: species
strain history
- @ref: 41736
- history: CIP <- 2012, A. Nemec, Inst. Pasteur, Paris, France: strain NIPH 1867 <- CCUG <- P. Bouvet 942
doi: 10.13145/bacdive139491.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Moraxellaceae
- genus: Acinetobacter
- species: Acinetobacter dispersus
- full scientific name: Acinetobacter dispersus Nemec et al. 2016
@ref: 41736
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Moraxellaceae
genus: Acinetobacter
species: Acinetobacter dispersus
type strain: no
Morphology
cell morphology
@ref | gram stain | confidence | cell shape | motility |
---|---|---|---|---|
69480 | negative | 99.972 | ||
41736 | negative | oval-shaped | yes |
Culture and growth conditions
culture medium
@ref | name | growth | composition | link |
---|---|---|---|---|
41736 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |
41736 | CIP Medium 72 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
41736 | positive | growth | 30 | mesophilic |
52112 | positive | growth | 30-37 | mesophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 52112
- oxygen tolerance: aerobe
spore formation
@ref | spore formation | confidence |
---|---|---|
69481 | no | 100 |
69480 | no | 99.992 |
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68369 | 25115 | malate | + | assimilation |
68369 | 17128 | adipate | - | assimilation |
68369 | 27689 | decanoate | + | assimilation |
68369 | 24265 | gluconate | - | assimilation |
68369 | 17306 | maltose | - | assimilation |
68369 | 59640 | N-acetylglucosamine | - | assimilation |
68369 | 16899 | D-mannitol | - | assimilation |
68369 | 16024 | D-mannose | - | assimilation |
68369 | 30849 | L-arabinose | + | assimilation |
68369 | 17634 | D-glucose | + | assimilation |
68369 | 5291 | gelatin | - | hydrolysis |
68369 | 4853 | esculin | - | hydrolysis |
68369 | 16199 | urea | - | hydrolysis |
68369 | 29016 | arginine | - | hydrolysis |
68369 | 17634 | D-glucose | - | fermentation |
68369 | 27897 | tryptophan | - | energy source |
68369 | 17632 | nitrate | - | reduction |
metabolite production
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
@ref | value | activity | ec |
---|---|---|---|
68369 | cytochrome oxidase | - | 1.9.3.1 |
68369 | gelatinase | - | |
68369 | beta-glucosidase | - | 3.2.1.21 |
68369 | urease | - | 3.5.1.5 |
68369 | arginine dihydrolase | - | 3.5.3.6 |
68382 | alkaline phosphatase | - | 3.1.3.1 |
68382 | esterase (C 4) | + | |
68382 | esterase lipase (C 8) | + | |
68382 | lipase (C 14) | - | |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | valine arylamidase | - | |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | trypsin | - | 3.4.21.4 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | alpha-glucosidase | - | 3.2.1.20 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 52112 C10:0 2.9 10 52112 C12:0 2.8 12 52112 C14:0 1 14 52112 C15:0 2.7 15 52112 C16:0 11.4 16 52112 C17:0 3.6 17 52112 C12:0 2OH 6.4 13.178 52112 C12:0 3OH 8.5 13.455 52112 C15:1 ω6c 0.7 14.856 52112 C16:1 ω7c 25.2 15.819 52112 C16:1 ω9c 0.6 15.774 52112 C17:1 ω8c 5 16.792 52112 C18:1 ω9c 25.6 17.769 52112 C18:2 ω6,9c/C18:0 ANTE 3.1 17.724 52112 unknown 12.486 0.6 12.486 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
52112 | - | - | + | + | - | + | - | - | - | - | + | + | - | - | - | - | - | - | - | - |
API 20NE
@ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
52112 | - | - | - | - | - | - | - | - | + | + | - | - | - | - | - | + | - | + | + | - | - |
Isolation, sampling and environmental information
isolation
@ref | country | origin.country | continent | sample type | isolation date |
---|---|---|---|---|---|
41736 | France | FRA | Europe | ||
52112 | France | FRA | Europe | Human leg ulceration | |
41736 | France | FRA | Europe | Human, Leg ulceration | 1990 |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host Body-Site | #Limb | #Leg |
#Host Body-Site | #Other | #Wound |
#Host | #Human |
Safety information
risk assessment
- @ref: 41736
- biosafety level: 1
- biosafety level comment: Risk group (French classification)
Sequence information
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Acinetobacter dispersus NIPH 1867 | GCA_000369545 | scaffold | ncbi | 70348 |
66792 | Acinetobacter sp. NIPH 1867 | 1217702.3 | wgs | patric | 1217702 |
66792 | Acinetobacter sp. NIPH 1867 | 2565956659 | draft | img | 1217702 |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
spore-forming | no | 100 | no |
motile | no | 90.752 | no |
flagellated | no | 93.836 | no |
gram-positive | no | 97.756 | no |
anaerobic | no | 98.749 | yes |
aerobic | yes | 95.607 | no |
halophile | no | 84.858 | no |
spore-forming | no | 96.107 | no |
thermophile | no | 99.902 | no |
glucose-util | no | 82.419 | yes |
glucose-ferment | no | 91.468 | yes |
External links
@ref: 41736
culture collection no.: CIP 110481, NIPH 1867, CCUG 34437
straininfo link
- @ref: 95981
- straininfo: 51045
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
41736 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20110481 | Collection of Institut Pasteur (CIP 110481) | |
52112 | Curators of the CCUG | https://www.ccug.se/strain?id=34437 | Culture Collection University of Gothenburg (CCUG) (CCUG 34437) | |
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
68369 | Automatically annotated from API 20NE | |||
68382 | Automatically annotated from API zym | |||
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
95981 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID51045.1 |