Strain identifier
BacDive ID: 139483
Type strain: 
Species: Escherichia coli
Strain history: CIP <- 1992, J. Bizet, Fresnes Hosp., France
NCBI tax ID(s): 562 (species)
version 8.1 (current version)
General
@ref: 41724
BacDive-ID: 139483
keywords: Bacteria, facultative anaerobe, mesophilic, Gram-negative, motile, rod-shaped
description: Escherichia coli CIP 103470 is a facultative anaerobe, mesophilic, Gram-negative bacterium of the family Enterobacteriaceae.
NCBI tax id
- NCBI tax id: 562
- Matching level: species
strain history
| @ref | history |
|---|---|
| 41724 | 1992, J. Bizet, Fresnes Hosp., France |
| 41724 | CIP <- 1992, J. Bizet, Fresnes Hosp., France |
doi: 10.13145/bacdive139483.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Enterobacteriaceae
- genus: Escherichia
- species: Escherichia coli
- full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacillus coli
@ref: 41724
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacterales
family: Enterobacteriaceae
genus: Escherichia
species: Escherichia coli
type strain: no
Morphology
cell morphology
- @ref: 41724
- gram stain: negative
- cell shape: rod-shaped
- motility: yes
Culture and growth conditions
culture medium
| @ref | name | growth | composition | link |
|---|---|---|---|---|
| 41724 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |
| 41724 | CIP Medium 3 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3 | |
| 41724 | CIP Medium 72 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72 |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 41724 | positive | growth | 30 | mesophilic |
| 41724 | positive | growth | 30-37 | mesophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 41724
- oxygen tolerance: facultative anaerobe
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 41724 | 16947 | citrate | - | carbon source |
| 41724 | 17234 | glucose | + | fermentation |
| 41724 | 17716 | lactose | + | fermentation |
| 41724 | 15792 | malonate | - | assimilation |
| 41724 | 132112 | sodium thiosulfate | - | builds gas from |
antibiotic resistance
- @ref: 41724
- metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
- is antibiotic: yes
- is sensitive: yes
- is resistant: no
metabolite production
- @ref: 41724
- Chebi-ID: 35581
- metabolite: indole
- production: yes
metabolite tests
| @ref | Chebi-ID | metabolite | voges-proskauer-test | methylred-test |
|---|---|---|---|---|
| 41724 | 15688 | acetoin | - | |
| 41724 | 17234 | glucose | - |
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 41724 | oxidase | - | |
| 41724 | beta-galactosidase | + | 3.2.1.23 |
| 41724 | alcohol dehydrogenase | - | 1.1.1.1 |
| 41724 | gelatinase | - | |
| 41724 | catalase | + | 1.11.1.6 |
| 41724 | lysine decarboxylase | + | 4.1.1.18 |
| 41724 | ornithine decarboxylase | + | 4.1.1.17 |
| 41724 | urease | - | 3.5.1.5 |
Isolation, sampling and environmental information
isolation
| @ref | geographic location | country | origin.country | continent | sample type | isolation date |
|---|---|---|---|---|---|---|
| 41724 | Fresnes | France | FRA | Europe | ||
| 41724 | Fresnes | France | FRA | Europe | Human, Foot | 1991 |
Safety information
risk assessment
- @ref: 41724
- biosafety level: 2
- biosafety level comment: Risk group (French classification)
External links
@ref: 41724
culture collection no.: CIP 103470
straininfo link
- @ref: 95974
- straininfo: 68365
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 41724 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20103470 | Collection of Institut Pasteur (CIP 103470) | |
| 95974 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID68365.1 |