Strain identifier
BacDive ID: 13948
Type strain: 
Species: Magnetospirillum fulvum
Strain Designation: 1360
Strain history: <- DSM <- N Pfennig, 1360
NCBI tax ID(s): 1082 (species)
version 8.1 (current version)
General
@ref: 2098
BacDive-ID: 13948
DSM-Number: 113
keywords: 16S sequence, Bacteria, anaerobe, mesophilic, spiral-shaped
description: Magnetospirillum fulvum 1360 is an anaerobe, mesophilic, spiral-shaped bacterium that was isolated from sewage pond.
NCBI tax id
- NCBI tax id: 1082
- Matching level: species
strain history
| @ref | history |
|---|---|
| 2098 | <- N. Pfennig, 1360 |
| 67771 | <- DSM <- N Pfennig, 1360 |
doi: 10.13145/bacdive13948.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Rhodospirillales
- family: Rhodospirillaceae
- genus: Magnetospirillum
- species: Magnetospirillum fulvum
- full scientific name: Magnetospirillum fulvum (van Niel 1944) Hördt et al. 2020
synonyms
@ref synonym 20215 Rhodospirillum fulvum 20215 Phaeospirillum fulvum
@ref: 2098
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhodospirillales
family: Rhodospirillaceae
genus: Magnetospirillum
species: Magnetospirillum fulvum
full scientific name: Magnetospirillum fulvum (van Niel 1944) Hördt et al. 2020
strain designation: 1360
type strain: yes
Morphology
cell morphology
| @ref | cell shape | gram stain |
|---|---|---|
| 67771 | spiral-shaped | |
| 67771 | negative |
Culture and growth conditions
culture medium
- @ref: 2098
- name: RHODOSPIRILLACEAE MEDIUM (modified) (DSMZ Medium 27)
- growth: yes
- link: https://mediadive.dsmz.de/medium/27
- composition: Name: RHODOSPIRILLACEAE MEDIUM (modified) (DSMZ Medium 27) Composition: Disodium succinate 1.0 g/l KH2PO4 0.5 g/l Ammonium acetate 0.5 g/l NaCl 0.4 g/l NH4Cl 0.4 g/l MgSO4 x 7 H2O 0.4 g/l Yeast extract 0.3 g/l L-Cysteine HCl 0.3 g/l CaCl2 x 2 H2O 0.05 g/l Fe(III) citrate 0.005 g/l Resazurin 0.005 g/l H3BO3 0.0003 g/l CoCl2 x 6 H2O 0.0002 g/l ZnSO4 x 7 H2O 0.0001 g/l MnCl2 x 4 H2O 3e-05 g/l Na2MoO4 x 2 H2O 3e-05 g/l NiCl2 x 6 H2O 2e-05 g/l CuCl2 x 2 H2O 1e-05 g/l Vitamin B12 Distilled water
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 2098 | positive | growth | 28 | mesophilic |
| 67771 | positive | growth | 25 | mesophilic |
Physiology and metabolism
oxygen tolerance
| @ref | oxygen tolerance |
|---|---|
| 2098 | anaerobe |
| 67771 | anaerobe |
observation
- @ref: 67771
- observation: quinones: Q-9, MK-9
Isolation, sampling and environmental information
isolation
| @ref | sample type |
|---|---|
| 2098 | sewage pond |
| 67771 | From sewage pond |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Waste | #Wastewater |
| #Environmental | #Aquatic | #Pond (small) |
taxonmaps
- @ref: 69479
- File name: preview.99_161038.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_215;96_2811;97_3451;98_4361;99_161038&stattab=map
- Last taxonomy: Magnetospirillum
- 16S sequence: D14433
- Sequence Identity:
- Total samples: 1
- animal counts: 1
Safety information
risk assessment
- @ref: 2098
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Rhodospirillum fulvum 16S ribosomal RNA | M59065 | 1434 | ena | 1082 |
| 20218 | Phaeospirillum fulvum 16S rRNA | D14433 | 1401 | ena | 1082 |
GC content
- @ref: 2098
- GC-content: 65.3
External links
@ref: 2098
culture collection no.: DSM 113, ATCC 15798, KCTC 15608, Pfennig 1360, SMG 113, NCIB 11762
straininfo link
- @ref: 83121
- straininfo: 44998
literature
- topic: Phylogeny
- Pubmed-ID: 21705442
- title: Phaeospirillum tilakii sp. nov., a phototrophic alphaproteobacterium isolated from aquatic sediments.
- authors: Raj PS, Chakravarthy SK, Ramaprasad EVV, Sasikala C, Ramana CV
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.032250-0
- year: 2011
- mesh: Anaerobiosis, Bacterial Typing Techniques, Base Composition, Cluster Analysis, Cytosol/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Geologic Sediments/*microbiology, Locomotion, Molecular Sequence Data, Nucleic Acid Hybridization, *Phototrophic Processes, Phylogeny, Pigments, Biological/analysis, Quinones/analysis, RNA, Ribosomal, 16S/genetics, Rhodospirillaceae/*classification/genetics/*isolation & purification/physiology, Rivers, Sequence Analysis, DNA
- topic2: Genetics
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 2098 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 113) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-113 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 67771 | Curators of the KCTC | https://kctc.kribb.re.kr/En/Kctc | ||||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 83121 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID44998.1 | StrainInfo: A central database for resolving microbial strain identifiers |