Strain identifier

BacDive ID: 139429

Type strain: No

Species: Campylobacter coli

Strain history: CIP <- 2011, CCM <- LMG <- ATCC <- J. Penner <- M. Karmali <- R. Kaplan: strain J.Penner 76-GA2: Serovar O:28

NCBI tax ID(s): 195 (species)

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General

@ref: 41608

BacDive-ID: 139429

keywords: Bacteria, microaerophile, mesophilic, Gram-negative, motile, rod-shaped

description: Campylobacter coli CIP 110282 is a microaerophile, mesophilic, Gram-negative bacterium that was isolated from Faeces, marmoset.

NCBI tax id

  • NCBI tax id: 195
  • Matching level: species

strain history

  • @ref: 41608
  • history: CIP <- 2011, CCM <- LMG <- ATCC <- J. Penner <- M. Karmali <- R. Kaplan: strain J.Penner 76-GA2: Serovar O:28

doi: 10.13145/bacdive139429.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Epsilonproteobacteria
  • order: Campylobacterales
  • family: Campylobacteraceae
  • genus: Campylobacter
  • species: Campylobacter coli
  • full scientific name: Campylobacter coli (Doyle 1948) Véron and Chatelain 1973 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Vibrio coli
    20215Campylobacter hyoilei

@ref: 41608

domain: Bacteria

phylum: Proteobacteria

class: Epsilonproteobacteria

order: Campylobacterales

family: Campylobacteraceae

genus: Campylobacter

species: Campylobacter coli

type strain: no

Morphology

cell morphology

  • @ref: 41608
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
41608MEDIUM 6 - Columbia agar with 10 % horse bloodyesDistilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
41608CIP Medium 45yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=45
41608CIP Medium 6yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=6

culture temp

  • @ref: 41608
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 41608
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
4160817632nitrate+reduction
4160816301nitrite-reduction

metabolite production

  • @ref: 41608
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
41608oxidase+
41608catalase+1.11.1.6
41608urease-3.5.1.5
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
41608--++-+----++--------

Isolation, sampling and environmental information

isolation

  • @ref: 41608
  • sample type: Faeces, marmoset

Safety information

risk assessment

  • @ref: 41608
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 41608

culture collection no.: CIP 110282, CCM 7227, ATCC 43478, LMG 21266, WDCM 00004, CECT 7571, NCTC 13638

straininfo link

  • @ref: 95932
  • straininfo: 14986

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
41608Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20110282Collection of Institut Pasteur (CIP 110282)
68382Automatically annotated from API zym
95932Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID14986.1