Strain identifier

BacDive ID: 13922

Type strain: No

Species: Zoogloea resiniphila

Strain Designation: PIV3A2w

Strain history: <- J. Harder, Max-Planck-Inst., Bremen; PIV3A2w <- J. Harder and Ch. Probian

NCBI tax ID(s): 40561 (species)

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General

@ref: 5527

BacDive-ID: 13922

DSM-Number: 14766

keywords: 16S sequence, Bacteria, mesophilic

description: Zoogloea resiniphila PIV3A2w is a mesophilic bacterium that was isolated from activated sewage sludge.

NCBI tax id

  • NCBI tax id: 40561
  • Matching level: species

strain history

  • @ref: 5527
  • history: <- J. Harder, Max-Planck-Inst., Bremen; PIV3A2w <- J. Harder and Ch. Probian

doi: 10.13145/bacdive13922.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Rhodocyclales
  • family: Zoogloeaceae
  • genus: Zoogloea
  • species: Zoogloea resiniphila
  • full scientific name: Zoogloea resiniphila Mohn et al. 1999

@ref: 5527

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Rhizobiales

family: Zoogloeaceae

genus: Zoogloea

species: Zoogloea resiniphila

full scientific name: Zoogloea resiniphila Mohn et al. 1999

strain designation: PIV3A2w

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
5527R2A MEDIUM (DSMZ Medium 830)yeshttps://mediadive.dsmz.de/medium/830Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
5527NUTRIENT AGAR (DSMZ Medium 1)yeshttps://mediadive.dsmz.de/medium/1Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

culture temp

  • @ref: 5527
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 5527
  • sample type: activated sewage sludge
  • country: Germany
  • origin.country: DEU
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Engineered#Waste#Activated sludge
#Engineered#Waste#Sewage sludge

taxonmaps

  • @ref: 69479
  • File name: preview.99_21666.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_129;96_3402;97_4177;98_16348;99_21666&stattab=map
  • Last taxonomy: Zoogloea resiniphila subclade
  • 16S sequence: AJ505851
  • Sequence Identity:
  • Total samples: 1701
  • soil counts: 178
  • aquatic counts: 1065
  • animal counts: 405
  • plant counts: 53

Safety information

risk assessment

  • @ref: 5527
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 20218
  • description: Zoogloea resiniphila partial 16S rRNA gene, strain PIV-3A2w
  • accession: AJ505851
  • length: 1479
  • database: ena
  • NCBI tax ID: 40561

External links

@ref: 5527

culture collection no.: DSM 14766

straininfo link

  • @ref: 83096
  • straininfo: 97658

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
5527Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 14766)https://www.dsmz.de/collection/catalogue/details/culture/DSM-14766
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
83096Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID97658.1StrainInfo: A central database for resolving microbial strain identifiers