Strain identifier

BacDive ID: 138977

Type strain: No

Species: Helicobacter hepaticus

Strain Designation: Hh3

Strain history: CIP <- 1994, J.G. Fox, Technol. Inst., Cambridge, MA, USA: strain Hh3 <- Lili Yan, Cambridge, MA, USA

NCBI tax ID(s): 32025 (species)

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General

@ref: 40978

BacDive-ID: 138977

keywords: Bacteria, mesophilic, Gram-negative, motile, rod-shaped

description: Helicobacter hepaticus Hh3 is a mesophilic, Gram-negative, motile bacterium of the family Helicobacteraceae.

NCBI tax id

  • NCBI tax id: 32025
  • Matching level: species

strain history

  • @ref: 40978
  • history: CIP <- 1994, J.G. Fox, Technol. Inst., Cambridge, MA, USA: strain Hh3 <- Lili Yan, Cambridge, MA, USA

doi: 10.13145/bacdive138977.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Epsilonproteobacteria
  • order: Campylobacterales
  • family: Helicobacteraceae
  • genus: Helicobacter
  • species: Helicobacter hepaticus
  • full scientific name: Helicobacter hepaticus Fox et al. 1994

  • synonyms

    • @ref: 20215
    • synonym: Helicobacter hepaticus

@ref: 40978

domain: Bacteria

phylum: Proteobacteria

class: Epsilonproteobacteria

order: Campylobacterales

family: Helicobacteraceae

genus: Helicobacter

species: Helicobacter hepaticus

strain designation: Hh3

type strain: no

Morphology

cell morphology

  • @ref: 40978
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

colony morphology

  • @ref: 40978

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
40978MEDIUM 45 - for Columbia agar with sheep bloodyesDistilled water make up to (1000.000 ml);Columbia agar (39.000 g);Sheepblood (100.000 ml)
40978CIP Medium 45yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=45

culture temp

@refgrowthtypetemperaturerange
40978positivegrowth37mesophilic
40978nogrowth5psychrophilic
40978nogrowth10psychrophilic
40978nogrowth25mesophilic
40978nogrowth30mesophilic
40978nogrowth41thermophilic
40978nogrowth45thermophilic

Physiology and metabolism

halophily

  • @ref: 40978
  • salt: NaCl
  • growth: no
  • tested relation: growth
  • concentration: 3.5 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
4097817632nitrate+reduction
4097816301nitrite-reduction

antibiotic resistance

  • @ref: 40978
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

  • @ref: 40978
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
40978oxidase+
40978gelatinase-
40978DNase-
40978catalase+1.11.1.6
40978gamma-glutamyltransferase-2.3.2.2
40978urease+3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
40978-+++------++--------

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typesampling dateisolation date
40978Cambridge, MAUSAUSANorth America
56477CambridgeUSAUSANorth AmericaMouse liver1993
40978Cambridge, MassachusettsUnited States of AmericaUSANorth AmericaAnimal, Mouse, liver1993

isolation source categories

Cat1Cat2Cat3
#Host Body-Site#Organ#Liver
#Host#Mammals#Muridae (Mouse/Rat)

Safety information

risk assessment

  • @ref: 40978
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 40978

culture collection no.: CIP 104101, ATCC 51450, CCUG 44776

straininfo link

  • @ref: 95584
  • straininfo: 42990

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
40978Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20104101Collection of Institut Pasteur (CIP 104101)
56477Curators of the CCUGhttps://www.ccug.se/strain?id=44776Culture Collection University of Gothenburg (CCUG) (CCUG 44776)
68382Automatically annotated from API zym
95584Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID42990.1