Strain identifier

BacDive ID: 138826

Type strain: Yes

Species: Ureaplasma urealyticum

Strain Designation: 2K 160, 960 (CX8)

Strain history: CIP <- 1993, D. Roulland-Dussoix, Inst. Pasteur, Paris: strain 2K 160 <- M.C. Shepard: T-strain 960 (CX8)

NCBI tax ID(s): 2130 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 40780

BacDive-ID: 138826

keywords: genome sequence, Bacteria, mesophilic, Gram-negative

description: Ureaplasma urealyticum 2K 160 is a mesophilic, Gram-negative bacterium that was isolated from Human, Nongonococcal urethritis.

NCBI tax id

  • NCBI tax id: 2130
  • Matching level: species

strain history

  • @ref: 40780
  • history: CIP <- 1993, D. Roulland-Dussoix, Inst. Pasteur, Paris: strain 2K 160 <- M.C. Shepard: T-strain 960 (CX8)

doi: 10.13145/bacdive138826.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/mycoplasmatota
  • domain: Bacteria
  • phylum: Mycoplasmatota
  • class: Mollicutes
  • order: Mycoplasmoidales
  • family: Mycoplasmoidaceae
  • genus: Ureaplasma
  • species: Ureaplasma urealyticum
  • full scientific name: Ureaplasma urealyticum Shepard et al. 1974 (Approved Lists 1980)

@ref: 40780

domain: Bacteria

phylum: Tenericutes

class: Mollicutes

order: Mycoplasmatales

family: Mycoplasmataceae

genus: Ureaplasma

species: Ureaplasma urealyticum

strain designation: 2K 160, 960 (CX8)

type strain: yes

Morphology

cell morphology

  • @ref: 40780
  • gram stain: negative
  • motility: no

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
40780MEDIUM 80 - for Ureaplasma urealyticumyesDistilled water make up to (740.000 ml);Trypto casein soy broth (24.000 g);Yeast extract solution 25 % - M00263 (20.000 ml);0.1 % Phenol red - M00387 (20.000 ml);Sterile supplement - M00270 (220.000 ml)
40780CIP Medium 80yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=80

culture temp

  • @ref: 40780
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 40780
  • sample type: Human, Nongonococcal urethritis

Safety information

risk assessment

  • @ref: 40780
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Ureaplasma urealyticum serovar 8 str. ATCC 27618GCA_000169535contigncbi626095
66792Ureaplasma urealyticum serovar 8 str. ATCC 27618626095.4wgspatric626095
66792Ureaplasma urealyticum sv. 8 ATCC 27618645951872draftimg626095

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
gram-positiveyes56.955no
anaerobicno95.912no
halophileyes51.078no
spore-formingno98.143no
glucose-utilyes84.128no
flagellatedno97.281no
aerobicno94.749no
thermophileno97.593no
motileno93.402no
glucose-fermentyes76.007no

External links

@ref: 40780

culture collection no.: CIP 103755, ATCC 27618, NCTC 10177, CCUG 38149, CCUG 50782

straininfo link

  • @ref: 95468
  • straininfo: 39089

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny11931172Proposal of Ureaplasma parvum sp. nov. and emended description of Ureaplasma urealyticum (Shepard et al. 1974) Robertson et al. 2001.Robertson JA, Stemke GW, Davis JW, Harasawa R, Thirkell D, Kong F, Shepard MC, Ford DKInt J Syst Evol Microbiol10.1099/00207713-52-2-5872002Genotype, Guidelines as Topic, Humans, Molecular Sequence Data, Phenotype, Species Specificity, Ureaplasma/*classification/isolation & purification, Ureaplasma urealyticum/classification/isolation & purificationGenetics
Pathogenicity18707551Transition mutations in 23S rRNA account for acquired resistance to macrolides in Ureaplasma urealyticum.Dongya M, Wencheng X, Xiaobo M, Lu WMicrob Drug Resist10.1089/mdr.2008.08172008Anti-Bacterial Agents/*pharmacology, Base Sequence, Drug Resistance, Bacterial/*genetics, Humans, Macrolides/pharmacology, Microbial Sensitivity Tests, Molecular Sequence Data, Mutation, Phenotype, RNA, Ribosomal, 23S/*genetics, Ureaplasma urealyticum/*drug effects/genetics/isolation & purificationGenetics
Metabolism31525453Differential cytokine and metabolite production by cervicovaginal epithelial cells infected with Lactobacillus crispatus and Ureaplasma urealyticum.Cavanagh M, Amabebe E, Anumba DOCAnaerobe10.1016/j.anaerobe.2019.1021012019Biomarkers, Cytokines/*metabolism, Epithelial Cells/metabolism/microbiology, Female, Gram-Negative Bacterial Infections/microbiology, HeLa Cells, Host-Pathogen Interactions, Humans, L-Lactate Dehydrogenase/metabolism, Lactobacillus crispatus/*physiology, Mucous Membrane/*metabolism/*microbiology, Ureaplasma Infections/microbiology, Ureaplasma urealyticum/*physiology, Vagina/*metabolism/*microbiologyPathogenicity

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
40780Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20103755Collection of Institut Pasteur (CIP 103755)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
95468Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID39089.1