Strain identifier

BacDive ID: 138820

Type strain: No

Species: Acinetobacter parvus

Strain history: CIP <- 2012, A. Nemec, Inst. Pasteur, Paris, France: strain NIPH 1103

NCBI tax ID(s): 1217671 (strain), 134533 (species)

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General

@ref: 40763

BacDive-ID: 138820

keywords: genome sequence, Bacteria, mesophilic, Gram-negative

description: Acinetobacter parvus CIP 110475 is a mesophilic, Gram-negative bacterium of the family Moraxellaceae.

NCBI tax id

NCBI tax idMatching level
1217671strain
134533species

strain history

@refhistory
407632012, A. Nemec, Inst. Pasteur, Paris, France: strain NIPH 1103
40763CIP <- 2012, A. Nemec, Inst. Pasteur, Paris, France: strain NIPH 1103

doi: 10.13145/bacdive138820.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Moraxellaceae
  • genus: Acinetobacter
  • species: Acinetobacter parvus
  • full scientific name: Acinetobacter parvus Nemec et al. 2003

@ref: 40763

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Moraxellaceae

genus: Acinetobacter

species: Acinetobacter parvus

type strain: no

Morphology

cell morphology

@refgram stainconfidencecell shapemotility
69480negative99.992
40763negativerod-shapedno

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
40763MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
40763CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

  • @ref: 40763
  • growth: positive
  • type: growth
  • temperature: 25
  • range: mesophilic

Physiology and metabolism

spore formation

@refspore formationconfidence
69481no100
69480no99.978

enzymes

@refvalueactivityec
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase-3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
40763--------------------

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typeisolation date
40763LeidenNetherlandsNLDEurope
40763LeidenNetherlandsNLDEuropeHuman, Skin1995

Safety information

risk assessment

  • @ref: 40763
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Acinetobacter parvus NIPH 1103GCA_000368005scaffoldncbi1217671
66792Acinetobacter parvus NIPH 11031217671.3wgspatric1217671
66792Acinetobacter parvus NIPH 11032565956643draftimg1217671

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
motileno90.795no
flagellatedno94.975no
gram-positiveno97.814no
anaerobicno97.287no
aerobicyes88.533no
halophileno90.234no
spore-formingno95.612no
thermophileno99.758yes
glucose-utilno91.322no
glucose-fermentno92.236no

External links

@ref: 40763

culture collection no.: CIP 110475, NIPH 1103, LMG 21766, LUH 3313

straininfo link

  • @ref: 95465
  • straininfo: 128230

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
40763Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20110475Collection of Institut Pasteur (CIP 110475)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
68382Automatically annotated from API zym
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1
95465Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID128230.1