Strain identifier

BacDive ID: 138598

Type strain: No

Species: Bacillus cereus

Strain history: CIP <- 1952, R.E. Gordon, New Jersey Agri. Exper. Stat., New Brunswick, USA: strain 201 <- L. Siribaed, Bacillus siamensis

NCBI tax ID(s): 1396 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 8.1 (current version)

General

@ref: 40167

BacDive-ID: 138598

keywords: Bacteria, facultative anaerobe, spore-forming, mesophilic, Gram-positive, rod-shaped

description: Bacillus cereus CIP 52.57 is a facultative anaerobe, spore-forming, mesophilic bacterium that was isolated from Blood.

NCBI tax id

  • NCBI tax id: 1396
  • Matching level: species

strain history

  • @ref: 40167
  • history: CIP <- 1952, R.E. Gordon, New Jersey Agri. Exper. Stat., New Brunswick, USA: strain 201 <- L. Siribaed, Bacillus siamensis

doi: 10.13145/bacdive138598.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Bacillus
  • species: Bacillus cereus
  • full scientific name: Bacillus cereus Frankland and Frankland 1887 (Approved Lists 1980)

@ref: 40167

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Bacillaceae

genus: Bacillus

species: Bacillus cereus

type strain: no

Morphology

cell morphology

  • @ref: 40167
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: no

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
40167MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
40167CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3
40167CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

  • @ref: 40167
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 40167
  • oxygen tolerance: facultative anaerobe

spore formation

  • @ref: 40167
  • spore formation: yes

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371gluconate+builds acid from24265
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose-builds acid from32528
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen+builds acid from28087
68371starch+builds acid from28017
68371raffinose-builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371trehalose+builds acid from27082
68371melibiose-builds acid from28053
68371lactose-builds acid from17716
68371maltose+builds acid from17306
68371arbutin+builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine+builds acid from59640
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371D-mannitol-builds acid from16899
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose-builds acid from16024
68371D-fructose+builds acid from15824
68371D-glucose+builds acid from17634
68371D-galactose-builds acid from12936
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose-builds acid from65327
68371D-ribose+builds acid from16988
68371L-arabinose-builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
40167nitrate+reduction17632
40167nitrite+reduction16301

metabolite production

  • @ref: 40167
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
40167oxidase-
40167catalase+1.11.1.6
40167urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase+3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin+3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
40167-+++++++++++---+----

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
40167+/----+-----++---------+-++/-+/-+/-+--+/-+---++---------+--

Isolation, sampling and environmental information

isolation

  • @ref: 40167
  • sample type: Blood

Safety information

risk assessment

  • @ref: 40167
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 40167

culture collection no.: CIP 52.57, ATCC 7064, NRRL : NRS-201

straininfo link

  • @ref: 95285
  • straininfo: 12346

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Enzymology1555585Assignment of Bacillus thermoamyloliquefaciens KP1071 alpha-glucosidase I to an exo-alpha-1,4-glucosidase, and its striking similarity to bacillary oligo-1,6-glucosidases in N-terminal sequence and in structural parameters calculated from the amino acid composition.Suzuki Y, Yonezawa K, Hattori M, Takii YEur J Biochem10.1111/j.1432-1033.1992.tb16775.x1992Amino Acid Sequence, Amino Acids/*analysis, Bacillus/*enzymology, Catalysis, Chromatography, Gel, Electrophoresis, Polyacrylamide Gel, Hot Temperature, Hydrogen-Ion Concentration, Hydrolysis, Immunodiffusion, Molecular Sequence Data, Oligo-1,6-Glucosidase/*chemistry/genetics, Substrate Specificity, alpha-Glucosidases/*chemistry/genetics/isolation & purificationStress
Enzymology1761534Proline residues responsible for thermostability occur with high frequency in the loop regions of an extremely thermostable oligo-1,6-glucosidase from Bacillus thermoglucosidasius KP1006.Watanabe K, Chishiro K, Kitamura K, Suzuki YJ Biol ChemS0021-9258(18)54226-51991Amino Acid Sequence, Bacillus/*enzymology, Base Sequence, Circular Dichroism, Cloning, Molecular, DNA, Bacterial/genetics, Hot Temperature, Molecular Sequence Data, Oligo-1,6-Glucosidase/*chemistry/genetics, Plasmids, Proline/*chemistry, Protein Conformation, Sequence Homology, Nucleic Acid, Spectrophotometry, UltravioletStress
Enzymology1915879Overproduction, purification and crystallization of Bacillus cereus oligo-1,6-glucosidase.Watanabe K, Kitamura K, Hata Y, Katsube Y, Suzuki YFEBS Lett10.1016/0014-5793(91)81264-91991Bacillus cereus/*enzymology, Crystallography, Oligo-1,6-Glucosidase/chemistry/*isolation & purification, Recombinant Proteins/isolation & purificationPhylogeny
Enzymology2120057Primary structure of the oligo-1,6-glucosidase of Bacillus cereus ATCC7064 deduced from the nucleotide sequence of the cloned gene.Watanabe K, Kitamura K, Iha H, Suzuki YEur J Biochem10.1111/j.1432-1033.1990.tb19267.x1990Amino Acid Sequence, Bacillus cereus/*enzymology/genetics, Base Sequence, Binding Sites, Cloning, Molecular, DNA Probes, *Genes, Bacterial, Genetic Vectors, Molecular Sequence Data, Oligo-1,6-Glucosidase/*chemistry/genetics/isolation & purification, Sequence Homology, Nucleic Acid, Species SpecificityPhylogeny
Enzymology3089779Purification and characterization of Bacillus coagulans oligo-1,6-glucosidase.Suzuki Y, Tomura YEur J Biochem10.1111/j.1432-1033.1986.tb09723.x1986Amines/pharmacology, Amino Acids/analysis, Bacillus/*enzymology, Carbohydrates/pharmacology, Edetic Acid/pharmacology, Glycoside Hydrolases/*analysis, Hydrogen-Ion Concentration, Hydrolysis, Kinetics, Metals/pharmacology, Oligo-1,6-Glucosidase/*analysis/antagonists & inhibitors/isolation & purification, Substrate Specificity, Sulfhydryl Reagents/pharmacology, TemperaturePhylogeny
Enzymology8001545Multiple proline substitutions cumulatively thermostabilize Bacillus cereus ATCC7064 oligo-1,6-glucosidase. Irrefragable proof supporting the proline rule.Watanabe K, Masuda T, Ohashi H, Mihara H, Suzuki YEur J Biochem10.1111/j.1432-1033.1994.tb20051.x1994Amino Acid Sequence, Bacillus cereus/*enzymology, Enzyme Stability, *Hot Temperature, Kinetics, Molecular Sequence Data, Mutagenesis, Site-Directed, Oligo-1,6-Glucosidase/*chemistry/genetics, Proline/*chemistry, Protein Structure, Secondary, Structure-Activity RelationshipStress
Proteome8370659Polypeptide folding of Bacillus cereus ATCC7064 oligo-1,6-glucosidase revealed by 3.0 A resolution X-ray analysis.Kizaki H, Hata Y, Watanabe K, Katsube Y, Suzuki YJ Biochem10.1093/oxfordjournals.jbchem.a1240971993Bacillus cereus/*enzymology, Molecular Structure, Oligo-1,6-Glucosidase/*chemistry, Protein Folding, Protein Structure, Secondary, X-Ray DiffractionEnzymology
Enzymology8787404Analysis of the critical sites for protein thermostabilization by proline substitution in oligo-1,6-glucosidase from Bacillus coagulans ATCC 7050 and the evolutionary consideration of proline residues.Watanabe K, Kitamura K, Suzuki YAppl Environ Microbiol10.1128/aem.62.6.2066-2073.19961996Amino Acid Sequence, Bacillus/genetics/*metabolism, Bacterial Proteins/chemistry/genetics/*metabolism, Base Sequence, Binding Sites, Cloning, Molecular, DNA, Bacterial/genetics, Enzyme Stability, Evolution, Molecular, Genes, Bacterial, Molecular Sequence Data, Oligo-1,6-Glucosidase/chemistry/genetics/*metabolism, Proline/chemistry, Protein Structure, Secondary, Sequence Homology, Amino Acid, TemperatureMetabolism
Enzymology9193006The refined crystal structure of Bacillus cereus oligo-1,6-glucosidase at 2.0 A resolution: structural characterization of proline-substitution sites for protein thermostabilization.Watanabe K, Hata Y, Kizaki H, Katsube Y, Suzuki YJ Mol Biol10.1006/jmbi.1997.10181997Amino Acid Sequence, Bacillus cereus/*enzymology, Binding Sites, Crystallography, X-Ray, Enzyme Stability, Hydrogen Bonding, Models, Molecular, Molecular Sequence Data, Oligo-1,6-Glucosidase/*chemistry/*metabolism, Proline/chemistry/metabolism, Protein Conformation, Protein Structure, Secondary, Salts, Sequence Homology, Amino Acid, Structure-Activity Relationship, TemperatureGenetics
Enzymology9692189Clustered proline residues around the active-site cleft in thermostable oligo-1,6-glucosidase of Bacillus flavocaldarius KP1228.Kashiwabara S, Matsuki Y, Kishimoto T, Suzuki YBiosci Biotechnol Biochem10.1271/bbb.62.10931998Amino Acid Sequence, Bacillus/*enzymology, Base Sequence, Binding Sites, Cloning, Molecular, Enzyme Stability, *Genes, Bacterial, Hot Temperature, Models, Molecular, Molecular Sequence Data, Oligo-1,6-Glucosidase/*chemistry/genetics, Proline/*analysis, Sequence Homology, Amino AcidStress
Enzymology11676021Identification of catalytic and substrate-binding site residues in Bacillus cereus ATCC7064 oligo-1,6-glucosidase.Watanabe K, Miyake K, Suzuki YBiosci Biotechnol Biochem10.1271/bbb.65.20582001Bacillus cereus/*enzymology, Binding Sites, Catalytic Domain, Electrophoresis, Gel, Two-Dimensional, Kinetics, Mutagenesis, Site-Directed, Oligo-1,6-Glucosidase/chemistry/*genetics/*metabolism, Point MutationMetabolism
Pathogenicity15652364Synthesis and antibacterial activity of 4-benzoyl-1-methyl-5-phenyl-1H-pyrazole-3-carboxylic acid and derivatives.Akbas E, Berber I, Sener A, Hasanov BFarmaco10.1016/j.farmac.2004.09.0032004Analysis of Variance, Anti-Bacterial Agents/*chemical synthesis/chemistry/pharmacology, Gram-Negative Bacteria/*drug effects, Gram-Positive Bacteria/*drug effects, Microbial Sensitivity Tests, Pyridazines/*chemical synthesis/chemistry/pharmacology, Structure-Activity Relationship
Biotechnology16355978Determination of the antimicrobial properties of oligo-2-hydroxy-1-naphthaldehyde.Yapici BM, Kaya I, Senol DDrug Metabol Drug Interact2005Anti-Bacterial Agents/pharmacology, Anti-Infective Agents/*pharmacology, Bacteria/drug effects, Food Contamination, *Food Microbiology, Fungicides, Industrial/pharmacology, Microbial Sensitivity Tests, Naphthalenes/*pharmacology, Polymers/*pharmacology, Yeasts/drug effectsPathogenicity
Pathogenicity20163896Synthesis, spectroscopic and biological studies on the new symmetric Schiff base derived from 2,6-diformyl-4-methylphenol with N-aminopyrimidine.Sonmez M, Celebi M, Berber IEur J Med Chem10.1016/j.ejmech.2010.01.0352010Anti-Bacterial Agents/chemical synthesis/chemistry/*pharmacology, Antifungal Agents/chemical synthesis/chemistry/*pharmacology, Bacillus cereus/drug effects, Candida/drug effects, Escherichia coli/drug effects, Ligands, Magnetic Resonance Spectroscopy, Mass Spectrometry, Microbial Sensitivity Tests, Micrococcus luteus/drug effects, Phenols/chemical synthesis/chemistry/*pharmacology, Pyrimidines/*chemistry, Schiff Bases/chemical synthesis/chemistry/*pharmacology, Spectrophotometry, Infrared, Spectrophotometry, Ultraviolet, Staphylococcus aureus/drug effects, Structure-Activity Relationship
Pathogenicity31365649Evaluating antimicrobial and antioxidant capacity of endemic Phlomis russeliana from Turkey and its antiproliferative effect on Human Caco-2 Cell Lines.Alpay M, Dulger G, Sahin IE, Dulger BAn Acad Bras Cienc10.1590/0001-37652019201804042019Anti-Bacterial Agents/isolation & purification/*pharmacology, Antioxidants/isolation & purification/*pharmacology, Caco-2 Cells, Candida albicans/*drug effects, Disk Diffusion Antimicrobial Tests, Gram-Negative Bacteria/classification/*drug effects, Gram-Positive Bacteria/classification/*drug effects, Humans, Phlomis/*chemistry, Plant Extracts/*pharmacology, TurkeyPhylogeny

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
40167Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2052.57Collection of Institut Pasteur (CIP 52.57)
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
95285Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID12346.1