Strain identifier

BacDive ID: 138526

Type strain: No

Species: Pseudomonas stutzeri

Strain history: CIP <- 2002, CCUG <- J. Ursing, PHL, MAS, Malmö, Sweden

NCBI tax ID(s): 203192 (species), 316 (species)

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General

@ref: 39927

BacDive-ID: 138526

keywords: Bacteria, aerobe, mesophilic, Gram-negative, motile, rod-shaped

description: Pseudomonas stutzeri CIP 107695 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from Waste water,enrichment for denitrifiers.

NCBI tax id

NCBI tax idMatching level
203192species
316species

strain history

  • @ref: 39927
  • history: CIP <- 2002, CCUG <- J. Ursing, PHL, MAS, Malmö, Sweden

doi: 10.13145/bacdive138526.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Pseudomonadaceae
  • genus: Pseudomonas
  • species: Pseudomonas stutzeri
  • full scientific name: Pseudomonas stutzeri (Lehmann and Neumann 1896) Sijderius 1946 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Stutzerimonas chloritidismutans
    20215Pseudomonas perfectomarinus
    20215Bacterium stutzeri
    20215Pseudomonas kunmingensis
    20215Pseudomonas chloritidismutans
    20215Stutzerimonas kunmingensis
    20215Stutzerimonas stutzeri
    20215Stutzerimonas perfectomarina
    20215Pseudomonas perfectomarina

@ref: 39927

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Pseudomonas

species: Pseudomonas stutzeri

type strain: no

Morphology

cell morphology

  • @ref: 39927
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

pigmentation

  • @ref: 39927
  • production: no
  • name: Pyocyanin

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
39927MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
39927CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
39927positivegrowth30mesophilic
49548positivegrowth37mesophilic
39927positivegrowth25-41
39927nogrowth5psychrophilic
39927nogrowth10psychrophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
49548aerobe
39927obligate aerobe

halophily

@refsaltgrowthtested relationconcentration
39927NaClpositivegrowth0-4 %
39927NaClnogrowth6 %
39927NaClnogrowth8 %
39927NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate+assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose+assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction
3992716947citrate+carbon source
399274853esculin-hydrolysis
3992717632nitrate+reduction
3992716301nitrite+reduction
3992717632nitrate+respiration

antibiotic resistance

  • @ref: 39927
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

@refChebi-IDmetaboliteproduction
6836935581indoleno
3992735581indoleno

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
39927oxidase+
39927beta-galactosidase-3.2.1.23
39927alcohol dehydrogenase-1.1.1.1
39927gelatinase-
39927amylase+
39927DNase-
39927caseinase-3.4.21.50
39927catalase+1.11.1.6
39927tween esterase+
39927lecithinase+
39927lipase-
39927lysine decarboxylase-4.1.1.18
39927ornithine decarboxylase-4.1.1.17
39927protease+
39927tryptophan deaminase-
39927urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    49548C10:00.310
    49548C12:012.512
    49548C14:01.314
    49548C16:016.716
    49548C10:0 3OH4.611.423
    49548C12:0 3OH4.113.455
    49548C16:1 ω7c3115.819
    49548C18:1 ω7c /12t/9t29.517.824
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
39927-+++++--+-++--------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
49548+-------+--++++++++-+

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
39927++-------++---------------+----+-+---------+++--+++--+++----+-++---+-----+-+++-+++++---+++++++-+++-

Isolation, sampling and environmental information

isolation

@refsample type
49548Waste water,enrichment for denitrifiers
39927Environment, Waste water

isolation source categories

  • Cat1: #Engineered
  • Cat2: #Waste
  • Cat3: #Wastewater

Safety information

risk assessment

  • @ref: 39927
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 39927

culture collection no.: CIP 107695, CCUG 29240

straininfo link

  • @ref: 95233
  • straininfo: 56617

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
39927Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20107695Collection of Institut Pasteur (CIP 107695)
49548Curators of the CCUGhttps://www.ccug.se/strain?id=29240Culture Collection University of Gothenburg (CCUG) (CCUG 29240)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
95233Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID56617.1