Strain identifier
version 7.1 (current version)
General
@ref: 39916
BacDive-ID: 138525
keywords: Bacteria, mesophilic
description: Histophilus somni CIP 107676 is a mesophilic bacterium of the family Pasteurellaceae.
NCBI tax id
- NCBI tax id: 731
- Matching level: species
doi: 10.13145/bacdive138525.20221219.7.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pasteurellales
- family: Pasteurellaceae
- genus: Histophilus
- species: Histophilus somni
- full scientific name: Histophilus somni Angen et al. 2003
@ref: 39916
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pasteurellales
family: Pasteurellaceae
genus: Histophilus
species: Histophilus somni
type strain: no
Culture and growth conditions
culture medium
- @ref: 39916
- name: MEDIUM 10 - Chocolate medium for Actinobacillus pleuropneumoniae, Capnocytophaga cynodegmi, Haemophilus and Neisseria
- growth: yes
- composition: Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml);PolyVitex mischung (10.000 ml)
culture temp
- @ref: 39916
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 39916
- geographic location: Michigan
- country: USA
- origin.country: USA
- continent: North America
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Histophilus somni ATCC 700025 | GCA_023502925 | contig | ncbi | 731 |
| 66792 | Pseudomonas sp. G11-1 G11-1 | GCA_024031555 | contig | patric | 2183750 |
External links
@ref: 39916
culture collection no.: CIP 107676, ATCC 700025
straininfo link
| @ref | passport |
|---|---|
| 20218 | http://www.straininfo.net/strains/840694 |
| 20218 | http://www.straininfo.net/strains/117417 |
Reference
| @id | authors | title | doi/url | journal | pubmed | catalogue |
|---|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | StrainInfo introduces electronic passports for microorganisms. | 10.1016/j.syapm.2013.11.002 | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 39916 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/5137 | Collection of Institut Pasteur (CIP 107676) | |||
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |