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Strain identifier

BacDive ID: 138525

Type strain: No

Species: Histophilus somni

NCBI tax ID(s): 731 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 39916

BacDive-ID: 138525

keywords: Bacteria, mesophilic

description: Histophilus somni CIP 107676 is a mesophilic bacterium of the family Pasteurellaceae.

NCBI tax id

  • NCBI tax id: 731
  • Matching level: species

doi: 10.13145/bacdive138525.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Histophilus
  • species: Histophilus somni
  • full scientific name: Histophilus somni Angen et al. 2003

@ref: 39916

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Histophilus

species: Histophilus somni

type strain: no

Culture and growth conditions

culture medium

  • @ref: 39916
  • name: MEDIUM 10 - Chocolate medium for Actinobacillus pleuropneumoniae, Capnocytophaga cynodegmi, Haemophilus and Neisseria
  • growth: yes
  • composition: Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml);PolyVitex mischung (10.000 ml)

culture temp

  • @ref: 39916
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 39916
  • geographic location: Michigan
  • country: USA
  • origin.country: USA
  • continent: North America

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Histophilus somni ATCC 700025GCA_023502925contigncbi731
66792Pseudomonas sp. G11-1 G11-1GCA_024031555contigpatric2183750

External links

@ref: 39916

culture collection no.: CIP 107676, ATCC 700025

straininfo link

@refpassport
20218http://www.straininfo.net/strains/840694
20218http://www.straininfo.net/strains/117417

Reference

@idauthorstitledoi/urljournalpubmedcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.StrainInfo introduces electronic passports for microorganisms.10.1016/j.syapm.2013.11.002Syst Appl Microbiol. 37: 42-50 201424321274
39916Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/5137 Collection of Institut Pasteur (CIP 107676)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes