Strain identifier

BacDive ID: 138432

Type strain: Yes

Species: Gluconobacter sphaericus

Strain history: CIP <- 1999, IFO <- M. Ameyama, Fac. Agri., Yamaguchi Univ., Tokyo

NCBI tax ID(s): 574987 (species)

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General

@ref: 39720

BacDive-ID: 138432

keywords: Bacteria, obligate aerobe, mesophilic, Gram-negative, rod-shaped

description: Gluconobacter sphaericus CIP 106061 is an obligate aerobe, mesophilic, Gram-negative bacterium that was isolated from Grape.

NCBI tax id

  • NCBI tax id: 574987
  • Matching level: species

strain history

  • @ref: 39720
  • history: CIP <- 1999, IFO <- M. Ameyama, Fac. Agri., Yamaguchi Univ., Tokyo

doi: 10.13145/bacdive138432.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Rhodospirillales
  • family: Acetobacteraceae
  • genus: Gluconobacter
  • species: Gluconobacter sphaericus
  • full scientific name: Gluconobacter sphaericus (Ameyama 1975) Malimas et al. 2008

  • synonyms

    • @ref: 20215
    • synonym: Gluconobacter oxydans subsp. sphaericus

@ref: 39720

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhodospirillales

family: Acetobacteraceae

genus: Gluconobacter

species: Gluconobacter sphaericus

type strain: yes

Morphology

cell morphology

  • @ref: 39720
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: no

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
39720MEDIUM 1 - for Acetobacter, Azotobacter, Gluconobacter, Gluconacetobacter, Mesorhizodium ciceri and Pseudomonas doudoroffiiyesDistilled water make up to (1000.000 ml);Agar (15.000 g);Yeast extract (5.000 g);Peptone (3.000 g);Mannitol (25.000 g)
39720CIP Medium 1yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=1

culture temp

@refgrowthtypetemperaturerange
39720positivegrowth25mesophilic
39720positivegrowth10-37
39720nogrowth41thermophilic
39720nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 39720
  • oxygen tolerance: obligate aerobe

halophily

@refsaltgrowthtested relationconcentration
39720NaClpositivegrowth0 %
39720NaClnogrowth2 %
39720NaClnogrowth4 %
39720NaClnogrowth6 %
39720NaClnogrowth8 %
39720NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
39720606565hippurate-hydrolysis
3972017632nitrate-reduction
3972016301nitrite-reduction

antibiotic resistance

  • @ref: 39720
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

enzymes

@refvalueactivityec
39720oxidase-
39720beta-galactosidase-3.2.1.23
39720alcohol dehydrogenase-1.1.1.1
39720gelatinase-
39720catalase+1.11.1.6
39720gamma-glutamyltransferase-2.3.2.2
39720lysine decarboxylase-4.1.1.18
39720ornithine decarboxylase-4.1.1.17
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase+3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
39720--++-+++--++--------

Isolation, sampling and environmental information

isolation

  • @ref: 39720
  • sample type: Grape

Safety information

risk assessment

  • @ref: 39720
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 39720

culture collection no.: CIP 106061, ATCC 33280, IFO 12467, NBRC 12467

straininfo link

  • @ref: 95164
  • straininfo: 2914

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
39720Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20106061Collection of Institut Pasteur (CIP 106061)
68382Automatically annotated from API zym
95164Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID2914.1